Bacillus subtilis subsp. subtilis BSP1: A7A1_3415
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Entry
A7A1_3415 CDS
T02384
Name
(GenBank) Polynucleotide phosphorylase PnpA
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bsl
Bacillus subtilis subsp. subtilis BSP1
Pathway
bsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7A1_3415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsl03019
]
A7A1_3415
03016 Transfer RNA biogenesis [BR:
bsl03016
]
A7A1_3415
Enzymes [BR:
bsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A7A1_3415
Messenger RNA biogenesis [BR:
bsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A7A1_3415
Transfer RNA biogenesis [BR:
bsl03016
]
Prokaryotic type
tRNA degradation factors
A7A1_3415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AGA24033
LinkDB
All DBs
Position
complement(2328401..2330518)
Genome browser
AA seq
705 aa
AA seq
DB search
MGQEKHVFTIDWAGRTLTVETGQLAKQANGAVMIRYGDTAVLSTATASKEPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVISIVMSV
DQNCSSEMAAMFGSSLALSVSDIPFEGPIAGVTVGRIDDQFIINPTVDQLEKSDINLVVA
GTKDAINMVEAGADEVPEEIMLEAIMFGHEEIKRLIAFQEEIVAAVGKEKSEIKLFEIDE
ELNEKVKALAEEDLLKAIQVHEKHAREDAINEVKNAVVAKFEDEEHDEDTIKQVKQILSK
LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALSVCTLGAL
GDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPSEK
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEHYTVLT
DIQGMEDALGDMDFKVAGTEKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLA
TLSESRKELSRYAPKILTMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIFISS
TDESGNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFVEIFSGKDGLVHISELALERV
GKVEDVVKIGDEILVKVTEIDKQGRVNLSRKAVLREEKEKEEQQS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagaaaaacatgtctttaccatagattgggccggaagaacgcttaccgttgaa
accggccagcttgccaaacaggcaaatggtgctgtgatgatccgctacggtgatacagca
gtacttagtacagcaaccgcttcaaaagaacctaaaccgcttgatttcttccctcttact
gtaaactatgaagaaagattatatgcggtagggaaaattccgggcggatttattaaaaga
gaaggacgtccaagtgaaaaagcggttcttgccagccgtttaattgaccgtccgatccgt
cctttgtttgccgatggattccgtaatgaagttcaagtcatcagcattgtcatgagtgtt
gaccaaaactgctcttcagaaatggctgccatgttcggttcatctcttgcactttctgta
tcggatattccgtttgaaggaccgattgcaggggttactgtcggacgcattgatgatcaa
tttatcattaacccgacagtcgatcagcttgaaaaaagcgacatcaatcttgtcgttgcc
ggcacgaaagatgcgattaacatggtagaagcgggagcggacgaagttcctgaggaaatc
atgcttgaagccattatgttcggccatgaagaaattaaacgcctgattgcattccaagaa
gaaattgttgcagcagtcggcaaagagaaatctgaaattaagctctttgaaattgatgaa
gagctaaatgaaaaagtaaaagctttggcagaagaggatctgctgaaagccatccaagtt
catgaaaagcatgcccgtgaagatgccattaacgaagtgaagaacgcagttgtggcaaaa
ttcgaggatgaagaacatgatgaagacacaatcaagcaagtgaagcagattttatccaag
cttgtgaaaaatgaagttcgccgcctgattactgaagagaaagtaagaccggacggccgc
ggtgtcgatcaaatccgtccgctctcttcagaggttggcctcttgccaagaacgcacggt
tcaggtctatttacaaggggacaaactcaggccctcagcgtttgtacgctaggtgctctg
ggagatgtgcaaatccttgacggcttaggtgtcgaagagtcaaaacggtttatgcatcat
tacaacttcccgcaattcagcgttggggaaacaggaccgatgcgcggaccgggacgtcgt
gaaatcggacacggagcactgggtgagcgtgcgcttgagccagttattccgtctgaaaaa
gacttcccttatactgtccgtcttgtttcagaagtgcttgaatcaaacggttctacatct
caagcaagcatttgcgcaagcacacttgcaatgatggatgctggtgtaccgattaaagcg
ccagttgctggtattgcgatgggtcttgtcaaatcaggcgaacattacactgtcttgact
gacatccaaggcatggaagacgcgctcggagatatggactttaaagtagcgggaactgaa
aaaggcgtaacggccctgcaaatggacattaaaattgaaggcctttccagagagattctt
gaagaagcgcttcagcaggcgaaaaagggcagaatggaaatcctcaacagcatgcttgca
acattaagcgaatcaagaaaagagctttctcgatatgcgcctaagatcttaacaatgacc
attaatcctgataaaatccgcgatgtcatcggaccaagcggaaaacaaatcaataagatc
atcgaagaaaccggtgttaaaattgatattgagcaggacggcacaatctttatttcctct
acagatgaaagcggcaaccaaaaagcgaaaaaaatcatcgaagaccttgtgagagaggtt
gaagtcggccaactttacctaggtaaagtgaaacggattgaaaaattcggggctttcgtt
gaaattttcagcggaaaagacggtttggtgcacatttcagagcttgcgcttgaacgcgta
gggaaagttgaagatgttgtaaaaatcggagacgagattcttgtcaaagtcactgaaatt
gataaacaaggacgagtgaatttatcccgcaaagcggtgctccgtgaagagaaagaaaaa
gaagaacaacaatcttaa
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