Bacillus smithii: BSM4216_0019
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Entry
BSM4216_0019 CDS
T03984
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bsm
Bacillus smithii
Pathway
bsm03030
DNA replication
bsm03430
Mismatch repair
bsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSM4216_0019
03430 Mismatch repair
BSM4216_0019
03440 Homologous recombination
BSM4216_0019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsm03032
]
BSM4216_0019
03400 DNA repair and recombination proteins [BR:
bsm03400
]
BSM4216_0019
Enzymes [BR:
bsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSM4216_0019
DNA replication proteins [BR:
bsm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSM4216_0019
DNA repair and recombination proteins [BR:
bsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSM4216_0019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_22
TIP49
DnaX_C
AAA_19
Rad17
AAA_16
AAA_assoc_2
AAA_5
Mg_chelatase
AAA_7
PIF1
AAA_28
DUF815
AAA_24
RNA_helicase
AAA_18
nSTAND3
Sigma54_activat
AAA_14
AAA_2
RCF1-5-like_lid
TsaE
Motif
Other DBs
NCBI-ProteinID:
AKP45421
LinkDB
All DBs
Position
1:27342..29033
Genome browser
AA seq
563 aa
AA seq
DB search
MSYQALYRVWRPQTFADVVGQEHVTKTLQNALLQQKISHAYLFTGPRGTGKTSAAKILAK
AVNCEHAPTMEPCNQCSACKGITDGSIPDVIEIDAASNTGVDDIRDIRDKVKYAPSAVPF
KVYIIDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFKRITT
QAIVERMKLIADESGVSYEENALRIIARAAEGGMRDALSLLDQAISFSNEKLTEEDALVV
TGSVGHSTLNHLGRAILEKDIASAMEGLESLFMKGKDPSRFTEDFIHYFRDLLLYKTAPQ
LEDTLEHPADEEFISLAREFPTDFIYDCIEILNQTQQEMKFTNHARIYLEVAFVKMSQAE
TKPVASQVQPDLSKLLSRIETLEQELHELRSRGLSPEETSPVKTPPKNPVRSHHDYKVPV
KKIEHILKEATKQDLQLLKSRWGEMLEILNQRQMRSQAALLNDAEPVAASPDSFVLKFKY
DIHCKMAMENAKFVEAISSVFGELTGVRYVPVGIPEEKWHIIRENFIRQQKENIADDGSR
NEEDPLIAEAVKLVGEDLLEIKD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagctttataccgtgtctggcgtccgcaaacttttgctgatgtcgtaggc
caagaacatgtgacgaagacattgcaaaatgccctccttcaacaaaaaatttctcatgct
tatttgttcacgggcccgcgaggaacgggaaaaacgagcgcggctaaaattttggccaaa
gccgtcaattgtgagcatgcaccaactatggagccttgtaatcaatgcagcgcatgcaaa
ggaattacggatggatcgataccggacgtaatagaaattgacgccgcttccaatacggga
gtggatgatattagggatattcgagataaagtcaaatatgcgccgagtgcggttcctttt
aaagtatacattattgatgaagttcacatgttgtcgattggcgctttcaatgctttgctg
aaaacgttggaagaaccgccgaaacatgttatttttattttagctacaacggagcctcat
aaaattccgctgaccattatttcaagatgtcagagatttgattttaagcgtattacaacc
caagcgattgtggaaagaatgaagctgatcgcagatgagtctggcgtttcgtacgaagaa
aatgctctgcggatcatagctcgggcagcggaaggcggaatgagggatgctttaagttta
ttggatcaggctatttccttcagcaatgaaaagttgacggaagaggatgcccttgtagtc
accggatccgttggacatagcacattgaatcatcttgggcgggctattttggaaaaagat
attgcatcagcaatggaagggttggaaagtctattcatgaaagggaaagacccttcaaga
tttacggaggatttcattcattattttcgagatctccttttatataaaacagcccctcag
ctcgaagatactttagagcaccctgctgatgaagaatttatttctttggctcgagagttt
ccgactgatttcatctatgattgcatagagattttaaatcaaactcaacaagaaatgaaa
ttcacgaatcatgctagaatatatttggaagtagctttcgtgaaaatgtctcaagcggaa
acaaaaccagtcgcatcgcaagttcagccggacttgtcgaaactgcttagcaggatcgaa
acactagaacaagagttgcatgaattgagaagcagaggactttccccggaagaaacttcc
cctgtgaaaacaccgccaaagaatccagtacggtcgcaccatgactataaagtgccggtg
aagaagatcgagcatattttaaaagaggcgaccaaacaggatttgcaattattgaaaagc
cggtggggagaaatgctcgaaattctcaatcaacgccaaatgcggtcacaggcggcatta
ctgaacgatgcggaaccagtagctgcttcgccggattcgtttgtattaaaatttaaatat
gacattcattgtaaaatggcgatggaaaatgcaaaatttgtagaagcgatttcttcggtg
tttggggaattgacgggagttcgctatgtgccggtgggtattccggaagaaaaatggcat
atcattcgcgaaaattttatcagacaacaaaaggagaacatcgccgatgacggcagccgt
aatgaggaagatcctctaattgccgaagcagtgaagcttgtgggagaagacttgctagag
attaaagattaa
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