Bacillus smithii: BSM4216_0109
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Entry
BSM4216_0109 CDS
T03984
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bsm
Bacillus smithii
Brite
KEGG Orthology (KO) [BR:
bsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsm03400
]
BSM4216_0109
DNA repair and recombination proteins [BR:
bsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BSM4216_0109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
Rad51
nSTAND3
AAA_16
AAA_24
AAA_14
NACHT
RecA
AAA_22
NTPase_1
KdpD
AAA_30
NPHP3_N
AAA
MeaB
ABC_tran
DUF7125
ArsA_ATPase
KTI12
SLFN-g3_helicase
AAA_5
ATPase_2
CbiA
MCM
AAA_31
DZR
GvpD_P-loop
Fer4_NifH
HypA
AAA_11
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AKP45492
LinkDB
All DBs
Position
1:108742..110115
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AA seq
457 aa
AA seq
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MVKKKTKFICQSCGYESPKWMGRCPGCGEWNQMVEEVDMTGRQKKTFIHSESSRISKPSP
LITVQSTEEPRTTTNMKEFNRVLGGGIVAGSLVLIGGDPGIGKSTLLLQISSQLASGGHK
VLYISGEESAKQIKLRADRLNVDSSNLYIYSETNLELINLAIDQLNPEFVIIDSIQTVYH
PEVTSAPGSVSQVRESTAEFMRMAKVQGMAIFIVGHVTKEGSIAGPRILEHMVDTVLYFE
GERHHSYRILRAVKNRFGSTNEMGIFEMKETGLIEVENPSEIFLEERAQSASGSTVVASM
EGTRPVLVEIQALIAPTSFNYPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAG
GVKLDEPAIDLAVAVSIVSSFRDKPTRSTDCIIGEVGLTGEVRRVTRIEQRVREAEKLGF
SRVIIPAHNLGGWNTPGKIEVIGVSTVEEALEYALGG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaaaaaaacaaaatttatttgtcaatcatgcggatatgaatcgccgaaatgg
atggggagatgtcccggatgcggggaatggaaccaaatggtggaagaagtggatatgacg
gggcgacaaaagaaaacatttattcattccgaatcttcgcggatttcgaagccatcaccg
ctcattacagtacaatcaacggaagagcctagaacgacaaccaatatgaaagaattcaac
cgtgttttaggcggaggaatcgtcgccggctctcttgttttaatcggaggagatccgggt
atcggaaagtcgacattgttgctgcaaatttccagccagctagcgagcgggggccataaa
gttttatatatatccggagaagaatcggcgaaacaaatcaaactgcgtgcggatcgcttg
aatgtggattctagcaatctctatatctattcagaaaccaatttggaattaataaacctt
gcgatcgatcaattaaatccggaatttgtcatcattgattcgattcaaactgtctaccac
cctgaagttacttccgccccgggcagcgtttcccaagtgcgggaaagtacggccgaattc
atgagaatggcgaaggtccaaggaatggctatctttattgtagggcacgtaacgaaagaa
ggctcgattgccggtcctagaattttggagcatatggttgatacagttctttatttcgaa
ggggagcggcatcattcttaccgcattttaagagcggttaaaaatcgctttggttctaca
aatgagatgggaatttttgaaatgaaagaaaccggactcatagaggtggaaaatccgtcg
gaaatctttttggaggagcgtgcgcaaagtgcatcggggtcaacggtagttgcttctatg
gaagggacacgccccgtgttggttgagatacaggcattgatagcaccgaccagttttaat
tatccgcgtcgaatggccacagggatcgatcataatagagtgtctcttttaatggcggta
ttggaaaaaagggtcggccttcttcttcaaaatcaagatgcttatttaaaagtggctggg
ggagtcaagcttgatgaacctgccattgatttagcggttgctgtcagcattgtgtccagt
ttccgcgacaagccgacacgatcaacagattgtataattggagaagtaggattaaccggt
gaagtcagaagggtaacgagaattgaacagcgagtgcgagaagcagaaaagctgggattt
tcccgtgtcattattccggcccataatcttggtggttggaatactccagggaaaatagag
gtgattggagtttcaacagtagaagaagcattggagtatgcgttgggaggatag
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