Bacillus smithii: BSM4216_1038
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Entry
BSM4216_1038 CDS
T03984
Name
(GenBank) ATP-dependent nucleasesubunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bsm
Bacillus smithii
Brite
KEGG Orthology (KO) [BR:
bsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsm03400
]
BSM4216_1038
Enzymes [BR:
bsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSM4216_1038
DNA repair and recombination proteins [BR:
bsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BSM4216_1038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AKP46339
LinkDB
All DBs
Position
1:900542..904024
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AA seq
1160 aa
AA seq
DB search
MSVRFILGRSGTGKTKFIIDEITHQLIENPSGKPIIYIVPDQMTFLSEYTLVNTPGLNGM
MRAQVYSFSRLAWKVLQETGGFARIHLSSAGLNMLIRKIIEERKENLRLFAKAADKSGFI
QHVEKALIELKRYCVGTDELAARRTEFEENGEAQLLIDKLHDLHLIYEEFENHLVDRYIA
SEDYFQLLAESIQKSEYLQDAQIYIDGFHSFTPQEYLVIYELMKAASQVSIALTLDRPYS
EELPRETDLFRMTGETYASLWKMARDSGISTENIMMTEFVRSKEQSLIHLERFFDKRPAK
PFIGEGAPVVFEAANRRAEIEGVAREIRRLVREHHHRYKEIAVLVRNGQDYQELIETIFY
DYEIPFFIDQKRTMLNHPFIELIRSSLEILTSFWRYEPVFRAVKTELLYPFKMKAEQIRE
KIDRFENYCLAHGVKGELWTTKKRWVYRRYRGLELTDAPQTDEERAIEEEINELRAMIRT
PVLRLDRRFRQAKNGRDFCEALYKYFEELDIPAKLERLSMEAEENGDLLAARDHEQAWNA
IIGLLDEFVEMLGDQPFTLKKFATILEAGIESMRFTNVPPSADQVIIADLELSRLSDIKT
AFIVGVNDGVLPAKMAEEGILTDEERERMASLGMKLAPTSKTRLLNEEFIAYKAFTTPSE
QLYLSYPIANEEGKALLPSLYIKRMKEIYPNIKEQLLLNDPSELEEQDQLSYISHPGTAI
SYLTSQIQLKLRNYPMYSIWWDVYNFYMSHQDWKWKARRILSSLFYRNEAKNLTEETSKE
LYGDHILASVSRMELFHGCPFSHFARFGLGLREREVFRLEAPDIGELFHGALKWMADEVK
KRGLGWKTLTKDQCAQLARESIQYLAPKLQNQILLSSNRYHYIKKKLESIISKASYILSE
HSRASGFEPIGLELGFGPKAELPPFTFTLKNGIKMELAGRIDRVDKAEENSSVFLRVIDY
KSSSKDLDLTEVYYGLALQMLTYLDIVLANSEQLIGTPALPAGVLYFHVHNPMLKTNKML
TMDEVEEEIFKQYKMKGLVLSDPNVVRLMDQTLETGDSAIISAGLKKDGTLNARSKAASD
NDFESLRKYVRKFYEKTGNDIVSGKIDIAPYKYKKKTPCEFCSFRSLCQFDPSFEENRYR
IIIPLKDEDVLKLIRERGEQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcgttttattttaggacgttccggaaccggaaaaacgaagttcataatagat
gaaattactcaccaattaatcgaaaatccatctggaaagccgattatttatatagtccct
gatcaaatgacttttttatccgaatatacgcttgtgaatactccgggattgaacggcatg
atgcgtgctcaagtttatagtttttcgcgtcttgcatggaaagttcttcaagaaacggga
ggattcgctcggattcacttgtcttcagccggtttaaatatgctgattcgaaaaatcatc
gaagaaagaaaagagaatctgcggctttttgctaaagcagcagacaaatcggggtttatt
cagcatgtggaaaaagcgcttattgaactgaaacgctattgcgttggcactgatgaactt
gcggccaggagaacggagtttgaggaaaatggagaggcccagcttttgattgataaattg
cacgatctccacttgatttacgaagagtttgaaaatcatctcgttgaccgctatattgca
tcggaggattattttcaattattggcggagtccatccaaaagtcggagtatttgcaagac
gctcaaatttatatcgatggattccacagttttactccccaagaatacttggtgatctac
gaattgatgaaagctgcatctcaagtttcgattgcgctgacactggaccgtccttattca
gaagaacttccgcgagaaacggatttgttccggatgactggcgaaacttatgcttccttg
tggaaaatggcccgcgattccgggatatcgacagaaaatatcatgatgacggagtttgtt
cgcagcaaggaacagagtcttattcatttggaacgcttttttgacaaaaggccggccaag
ccgtttattggggaaggcgcgcccgttgttttcgaggcggcgaacaggagagcagagatt
gaaggagtggcaagagaaatccgaagacttgtccgtgaacatcatcatcgttataaagag
atagcagtgttggtcagaaacggacaagattatcaggaattgattgaaactattttttat
gactacgagattccgttttttattgatcaaaaaagaaccatgttaaatcatccttttatt
gaattgattcgttccagtcttgaaattttaactagcttttggcgttatgaaccggttttt
cgcgctgtcaaaacagagcttctttatcctttcaagatgaaagcagagcagataagagaa
aaaatagaccggtttgaaaactattgtttggctcacggagtgaaaggggaactgtggaca
acaaaaaaacgctgggtttacagaagatacagaggacttgagctgacggacgcaccgcaa
acggacgaggagcgggcaatagaggaagaaataaacgaattgcgggctatgattcgaacg
cctgttttacggctcgatcgacggtttcgtcaagcgaaaaacggaagagatttttgcgag
gcgctttataagtattttgaagaactggatattccggcgaaactggaaagactcagtatg
gaagctgaagaaaacggggatttactggcagctcgtgatcatgaacaagcgtggaatgct
atcattggattgctggacgagtttgtagagatgcttggcgaccagccttttacgctgaag
aaattcgcaacgatcctcgaagcgggcattgaatcgatgcgatttaccaatgttccacca
tctgccgatcaagtcatcatcgccgatttggaattgtcacgtctttcggatatcaagacc
gcatttatcgtcggagtgaacgatggagttttgccggccaaaatggcagaggaaggtatt
ttgacggatgaagagagggaacggatggcttcattagggatgaagcttgcaccaacgagc
aaaaccaggttgctgaatgaagagtttattgcttacaaagcgtttacaactccatctgaa
caactttatctatcttacccgatcgctaatgaagaagggaaagctttgcttccttccctc
tacatcaaaagaatgaaggaaatatatccgaatataaaagaacagctattgttgaacgat
ccttccgaactggaggagcaggatcaactgtcttacatttcccatccggggacggctatt
tcgtatttaacgtctcaaattcagcttaaattacggaattatccaatgtattccatttgg
tgggatgtctacaatttttatatgagccaccaagattggaagtggaaggcaaggagaatt
ttgtccagtttgttttatcgaaatgaagcgaagaatttaacagaggaaacaagcaaagag
ctttacggagaccatattttggctagcgtttcgagaatggagcttttccatggctgtccg
ttttcccattttgctcgattcgggctcggtcttcgagaacgagaggtgttccgtttagaa
gctcccgatatcggtgagctgttccacggagcgttaaaatggatggccgatgaagtgaaa
aaaagaggtctcggctggaagacattgacgaaagatcagtgtgcgcaattggcaagagaa
tcgattcaatatttggcgccaaagctgcaaaatcaaattttattgagttcgaaccgctat
cattatattaagaaaaagcttgaatctattatcagcaaggcttcttacattttaagcgaa
cattcacgggcaagcgggtttgagccaatcgggctggaattaggatttggaccaaaagca
gaacttccgccttttacgttcactttgaaaaacggcatcaaaatggagctggcaggaaga
atcgatcgtgttgataaagcggaagaaaacagtagtgtatttttaagggtgattgattat
aaatccagcagcaaggatcttgatttaacagaagtttattatggtcttgctcttcaaatg
ttgacgtatttagatattgtgttggcgaattcggaacagttgataggaacccctgcattg
cctgccggagtgttgtatttccatgtccataatccgatgctgaaaacgaataaaatgctg
acgatggacgaggtggaagaagaaatttttaaacaatacaaaatgaaaggacttgtgcta
agcgatccgaacgtggtccgattgatggatcaaactttggaaacgggggattcggccatc
atttccgccggactgaaaaaagacggaacgcttaacgcgcgttcaaaagcagcttctgat
aatgattttgaatcgctgagaaaatatgtacggaagttctatgaaaagaccggcaatgat
attgtctccgggaaaatcgatattgccccatacaaatataaaaagaaaacaccttgcgaa
ttttgttctttccgttcactgtgccagtttgacccaagttttgaggaaaatcgatatcga
atcatcatacctctaaaagatgaagatgtattaaagttgatacgcgaaaggggcgagcaa
tga
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