Bacillus smithii: BSM4216_1570
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Entry
BSM4216_1570 CDS
T03984
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsm
Bacillus smithii
Brite
KEGG Orthology (KO) [BR:
bsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsm03032
]
BSM4216_1570
03400 DNA repair and recombination proteins [BR:
bsm03400
]
BSM4216_1570
Enzymes [BR:
bsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSM4216_1570
DNA replication proteins [BR:
bsm03032
]
Prokaryotic type
DNA Topoisomerases
BSM4216_1570
DNA repair and recombination proteins [BR:
bsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSM4216_1570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_2
SAND
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AKP46851
LinkDB
All DBs
Position
1:1364543..1366618
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIEKYLGKKYKVKASMGHVRDLPKSQMGVDIKNRFEPKYITIRGK
GAILKELKSAAKKAKKVYLAADPDREGEAIAWHLAHSLNLDIDSDCRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRVLDRLVGYKISPLLWKKVKKGLSAGRVQSVALRLIIDREK
EIQNFKPEEYWTIEAVFRKNSDRFQASFYGIDGKKQDVKSEEQVKEILAKLNGEEFTVDS
VTKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEVAQKESLQYIEEHFGKNYTPTEKRKERKQTNAQDAHEAIRPTSTFREPAKIK
EYLTRDQFKLYKLIWERFVASQMAPAIMDTISVDLLQNGVMFRANGSKIKFPGFMKVYVE
GTDDNKEEKENWLPDLQKGDRVNSEKIEPVQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVSLDNKRFVPTELGEIVYELLLEFFSEIVDVEFTANMEKELDEIEEGK
VEWIKVIDDFYKGFEKHLDKAEQEMEKVEIKDEYAGEDCERCGSPMVFKMGRYGKFMACS
NFPECRNTKPIVKEIGVKCPKCHKGNIIERKSKKSRIFYGCDRYPECDFLSWDKPIDRKC
PKCEGLLVEKKLKKGVQVQCTQCEYKEQPQQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattatctcgtaatagtggaatccccagcaaaagcaaaaaccattgaaaaatat
ttggggaaaaaatataaagtgaaggcttccatggggcatgtccgcgatttgcctaaaagc
caaatgggagttgatataaaaaatcgttttgaaccaaaatatattactattcgcggaaaa
ggcgccatcttaaaagagctgaaatcagcagccaaaaaggcgaaaaaagtttatcttgcc
gccgacccggaccgtgaaggagaagccattgcatggcatctggctcacagcttaaacctt
gatatagactctgattgccgtgtagtttttaatgaaatcacaaaagatgccattaaagaa
tctttcaaacatccacggccgatcaatatggatttggtcgatgcccagcaggcgcgcagg
gtgctggatcgtctcgtagggtataaaataagcccgctgctttggaagaaagtaaaaaaa
ggattgagcgcaggccgagttcaatcggttgcacttcggcttatcatcgatcgagaaaaa
gaaattcagaattttaagccggaggaatattggacgatcgaagcagtctttcgaaaaaat
agcgatcgttttcaagcttcgttttacgggatcgatggaaaaaaacaggatgtgaaatca
gaggagcaagtaaaggaaattttagccaaacttaacggagaagaattcacggttgatagc
gttacgaaaaaagaacgaaaacgaaaccctgctccgccttttaccacatcttctttacag
caagaagctgccagaaagcttaatttccgtgcgaagaaaacaatgatgatcgcccagcag
ctttatgaagggattgatctgggaaaagaaggcacggtcggtttgattacgtacatgaga
accgattcgacacgtatatcggaagtggctcagaaagaatctttacagtatatagaagaa
cattttggaaaaaactatactccaacggaaaagcgaaaagaaagaaagcaaacaaatgcc
caagatgcccatgaagcgattcggcctaccagcacatttagagagccggcgaaaataaaa
gaatatttaaccagagatcaatttaaactgtataaactgatttgggagcgttttgtagct
agtcaaatggctcctgcgatcatggataccatcagtgtggatcttctgcaaaatggggtc
atgtttcgggcaaatggttcgaaaataaaatttccgggatttatgaaagtttatgtggaa
ggaacggacgataacaaagaagaaaaggaaaattggttgcctgatttacaaaaaggtgat
agagtaaattcggaaaaaattgaacctgtacagcattttacacaaccaccgccaagatat
acggaagctcgtttagtgaaaacgctggaggagcttggaattggacggccatccacctat
gctcctactcttgatacgatacaaaaacgaggctatgtgtctttagataataaacgcttt
gttcccacagagcttggcgaaattgtctatgaattattgcttgagtttttctcggaaatt
gtagatgtggaatttacggccaatatggaaaaggaattggatgaaatcgaagaaggaaaa
gtagagtggatcaaagtcatagatgatttttacaaaggctttgaaaaacatttggataaa
gcagaacaagaaatggaaaaagtagaaataaaagatgagtatgccggggaagattgcgaa
cgatgcggaagcccgatggtatttaaaatgggcagatacggaaagtttatggcctgcagc
aattttccggaatgccgaaacactaagccgatagtgaaagaaatcggagtgaaatgcccg
aaatgccataaaggaaatataatagaaagaaaaagcaaaaaaagccggattttttacggc
tgcgaccgttatccggaatgcgattttctttcatgggataaaccgattgatcgtaaatgc
ccgaaatgcgaaggactgttagtagaaaaaaaattaaaaaaaggcgtgcaagttcaatgt
acacagtgtgaatataaagaacaaccgcaacaataa
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