Bacillus smithii: BSM4216_2391
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Entry
BSM4216_2391 CDS
T03984
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsm
Bacillus smithii
Pathway
bsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSM4216_2391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsm03019
]
BSM4216_2391
03400 DNA repair and recombination proteins [BR:
bsm03400
]
BSM4216_2391
Enzymes [BR:
bsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSM4216_2391
Messenger RNA biogenesis [BR:
bsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSM4216_2391
DNA repair and recombination proteins [BR:
bsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BSM4216_2391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AKP47631
LinkDB
All DBs
Position
1:complement(2091864..2093345)
Genome browser
AA seq
493 aa
AA seq
DB search
MELELLLRKQFGYSSFRTGQKEVITSLLEGKDTLAMLPTGTGKSLCYQLPAYILDGTCII
ISPLLSLMQDQMEQMKMRGEKRVIALNSFLSFEEKKRALSRLGQFRFVFMSPEMLSNQRV
LHELSKIRLSLFVVDEAHCISQWGHDFRPDYLKIGEARELLNRPLTLALTATATEEVRTD
IMKYLHLQDANQWIFSVDRANIAMSVQHCESYKEKLDSLLVIVKNVQKPGIIYFSSKKAA
EETAYWLEQEGIKKVGVYHGGMEQDERILIQQQFLFNELEIICATSAFGMGINKNDIRFV
VHFHPPGQMESYLQEIGRAGRDGKRSLAILLYADGDERIHERLMETELPTDKQIEAFLTY
EPNLKKEAAAVLQLTDVQYRYLLHYEELYKDFSFEKKWEYIQRDKNEQIRRKRRKLSQMV
QWIHSTSCRREGVLLYFHEKFGSKPERCCDCCGLNILDYYESTAGQSRQEEMNDWEAILQ
NLLLMEGKIDEKE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgaactgttattacgaaaacaatttggctattcgtcatttcgaaccggacag
aaagaagtcattacttcactgcttgaaggaaaagatacactcgccatgcttccaaccggg
acagggaaatcactttgctaccaactgccggcctacatattagacggtacatgtattatc
atttcacctcttctttctttaatgcaagatcaaatggaacaaatgaagatgcgaggggaa
aaaagggttattgctttgaactctttcctctcctttgaagaaaaaaaacgtgcactttcc
cgtttagggcaatttcgttttgtttttatgtctcctgagatgctttctaatcaacgggtg
ttgcatgaattatccaaaatccgcctttcattgtttgtagtggacgaagcccactgcatt
tcccaatgggggcacgattttcgtcctgattatttaaaaatcggcgaagcacgtgaatta
ttgaaccggccattgacgcttgcgctgacggcgactgcaacagaagaagtgagaacggac
atcatgaagtacttacatcttcaagatgcgaatcaatggatcttttcggttgaccgagcc
aatattgcgatgagtgttcaacattgcgaaagttataaagaaaagctggacagtcttttg
gtgattgtcaaaaacgtacaaaaaccaggcattatttatttttccagcaagaaggctgcc
gaagaaacggcttattggctcgaacaagaagggataaaaaaagtaggcgtttatcatggc
ggaatggaacaggacgaaagaatcttaatacagcagcaatttttatttaacgagttggag
attatctgtgcaacgagcgcgtttgggatggggatcaataaaaacgatattcgattcgtc
gtccatttccatccaccgggtcaaatggaatcgtacttgcaggaaattggccgcgctggt
cgtgatggtaaaagaagtttggcgatcttgttgtacgccgacggagatgaacgcatacac
gagcgtttaatggaaacggaattgcctacggacaaacaaattgaagcattccttacatat
gagccgaacttaaaaaaggaagcggcggctgttctacaactgacggatgtccagtatcgt
tatcttcttcactacgaggaactatacaaagatttttcattcgaaaaaaaatgggagtat
atccaaagagacaaaaatgagcagatccgtaggaagcgcaggaaattgagtcaaatggtc
cagtggatccatagcacttcttgccgtagagaaggagttcttttatattttcatgaaaag
tttggatcgaagccggaaaggtgttgcgactgctgtgggctgaatattctcgattattat
gaatcgacagccggccagtccaggcaagaagaaatgaatgattgggaggccattctacaa
aacttgcttttgatggaaggaaaaatcgatgaaaaagaataa
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