Bacillus smithii: BSM4216_3742
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Entry
BSM4216_3742 CDS
T03984
Name
(GenBank) Uracil-DNA glycosylasefamily 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bsm
Bacillus smithii
Pathway
bsm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSM4216_3742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsm03400
]
BSM4216_3742
Enzymes [BR:
bsm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BSM4216_3742
DNA repair and recombination proteins [BR:
bsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSM4216_3742
Prokaryotic type
BSM4216_3742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKP48897
LinkDB
All DBs
Position
1:complement(3266384..3267073)
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AA seq
229 aa
AA seq
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MKKKILSNDWAPLLEEEFEKEYYLRLREFLKKEYQTKIVYPDMYDIFNALHFTPYKNVKV
VLLGQDPYHGPNQAHGLSFSVKPNVPIPPSLKNIFQELHDDLGCYIPDNGCLIPWARQGV
LLLNTVLTVRQGEAHSHRGKGWEQFTDRVISLINNREKPAVFILWGRPAQSKLPLIDQTK
HFIIRSPHPSPLSANRGFFGSRPFSKANRFLREIGETEIDWQIPNLSFF
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaattctatccaatgactgggctccgttattggaggaagaatttgaaaaa
gaatattatctacgcttgcgtgaatttttaaaaaaagaatatcaaacaaaaattgtttat
ccggacatgtatgatattttcaatgcccttcattttactccctacaagaacgtaaaagta
gtgcttttagggcaagatccttatcatggacctaatcaggcccacggtttaagtttttca
gtcaaaccgaatgttccaatccctccttctttaaaaaatatttttcaagaattgcatgat
gatctaggctgctatattcctgataacggctgtttgatcccttgggcgcgccaaggcgtt
ttgctgttaaatacagttttaacggttcgtcaaggagaagcccattctcaccgcggaaaa
ggatgggagcaatttaccgatcgggtgatttcgctcatcaataatcgagaaaaaccggcg
gtatttattttgtgggggcgtccggctcaaagcaaattgccgctgattgatcagacgaag
cattttatcatccgctcgccgcatcctagtccattgtccgcaaaccgaggattttttggc
agccgtccgttttcaaaagcaaatcgctttttgcgggaaataggtgagacagaaattgac
tggcaaattcccaatctttcattcttttga
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