Bacillus subtilis BSn5: BSn5_02000
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Entry
BSn5_02000 CDS
T01417
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsn
Bacillus subtilis BSn5
Pathway
bsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSn5_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsn03019
]
BSn5_02000
03400 DNA repair and recombination proteins [BR:
bsn03400
]
BSn5_02000
Enzymes [BR:
bsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSn5_02000
Messenger RNA biogenesis [BR:
bsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSn5_02000
DNA repair and recombination proteins [BR:
bsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BSn5_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
DUF6119
Motif
Other DBs
NCBI-ProteinID:
ADV93034
LinkDB
All DBs
Position
complement(383984..385474)
Genome browser
AA seq
496 aa
AA seq
DB search
MTKLQQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVL
IVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVLEHIHRYKFLYLSPEALQSPY
VLEKLKSVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKKLGHPPVLALTATATKETLQ
DVMNLLELQHAVRHLNSVNRPNIALRVENAADTAEKIDRVIQLVENLQGPGIVYCPTRKW
AEELAGEIKSKTSSRADFYHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRY
VIHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVTAEEIADVIR
VLEKTEERDERRLRDVLLQYGVGETQARMMIHLFMQGKTSVELMKKEISYRMELKLEKMH
RVSFLLQRDGCLRQALLTYFDESYEPDDGNLPCCSHCGFDLSLYEQKGERSKMAPLDSWS
SELHRIFSLQTVGELN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattacagcaaacgttatatcagttttttggttttacttcctttaaaaaaggg
cagcaggacattattgaaagcatactcagcgggaaggataccattgcaatgctcccgact
gggggagggaaatcgctttgctaccagctgcctggttatatgcttgacggcatggtatta
atcgtttctccactgctttctttaatggaggatcaggtgcagcagctgaaagcccggggg
gaaaagcgtgctgcagctttgaacagcatgcttaacaggcaggaaagacaatttgtttta
gaacatattcatcgatataaatttttgtacttgtctcctgaagctttacagtctccatat
gtattggaaaaattgaaaagcgtcccgatcagcctatttgttattgacgaagcgcattgt
atttctgaatggggacacgacttcaggcctgattattcaaagctcggacagctgagaaaa
aaacttggacacccgcccgttctggcattgaccgccacggctacaaaggaaacgctgcaa
gatgtcatgaacctgctggagctgcagcatgctgtacgccatctcaactcagtcaaccgc
ccaaacatcgcactgagggttgaaaatgcggcggatactgccgaaaaaatagatagggtc
attcagctggttgaaaacctgcaaggtccgggaattgtttattgtccgacacggaaatgg
gctgaggaattagcgggtgaaattaaaagcaaaacgagcagcagagccgacttttaccat
ggcggtttggagtcaggggacaggattttaattcagcagcagtttattcataaccagctt
gatgtgatatgttgtacgaatgcgtttggaatgggtgtcgataaacccgatatcagatat
gtgattcattttcacctcccgcagacggcagaagcttttatgcaggaaatcggcagagcg
ggccgcgacggaaagccgagtgtcagcattttgctgcgggcgccaggggattttgaattg
caggaacagattatccagatggagagtgtcacagctgaagaaatcgccgacgtgatccgt
gtgctagagaagacggaggagcgggatgagagaaggcttcgtgacgtattacttcagtat
ggcgtcggagagacacaggcccgtatgatgattcatctctttatgcaggggaaaacatca
gttgaactgatgaagaaagaaatttcatatcgcatggagctgaagctggaaaaaatgcac
cgtgtatcatttttgcttcagcgtgatggctgtttaaggcaggcactattaacctacttt
gatgaatcatacgagcctgatgacggaaacctcccgtgctgttcacattgcggttttgat
ttatccttgtatgaacaaaaaggggaacggagtaaaatggcgccattagacagctggagt
tcggaattgcaccggatattcagcttgcagactgtaggtgagctgaactga
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