Bacillus subtilis BSn5: BSn5_08035
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Entry
BSn5_08035 CDS
T01417
Name
(GenBank) RNA polymerase sigma-54 factor (sigma-L)
KO
K03092
RNA polymerase sigma-54 factor
Organism
bsn
Bacillus subtilis BSn5
Pathway
bsn02020
Two-component system
bsn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSn5_08035
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSn5_08035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsn03021
]
BSn5_08035
Transcription machinery [BR:
bsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSn5_08035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR_2
HTH_17
DUF1425
HTH_IclR
Sigma70_r4
HTH_21
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADV94231
LinkDB
All DBs
Position
complement(1525499..1526809)
Genome browser
AA seq
436 aa
AA seq
DB search
MDMKLQQVQVLKPQLTQELRQAITLLGYHSAELAEYIDELSLENPLIERKETDTPPLSYH
KTNKNRMNAQEAGLQLSDPQKTLQDALKQQSLDMNLTNTEKKIFNYLIHSLDSNGYLEED
VEEAARRLSVSAKETEAVLAKLQSLEPAGIGARSLQECILLQLQRLPNRNEQAEMLVSAH
FDAFAQKKWKALSVEAGIPLHTIQDISDDIAALHPRPGLLFARPEQDVYIEPDIFITVKN
GHIAAELNTRSFPEIDLHPQYRTLLSSGSCQDTVSYLSAKYQEWRWLSRALRQRKQTITR
IINELITRQKDFFLKGRSAMKPLTLREVADCLSLHESTVSRAIKGKTIQTPYGLFEMKLF
FSAKAEASGEGDASNYAVKMHLEDLINQEDKTKPLSDQKLVDLLYEQHGIQISRRTVAKY
RDQMNIPSSAARKRYK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaacttcagcaagtacaagtattaaagcctcaactgacacaggagctcagg
caggccatcacgctgcttggctatcattcggcagaactcgccgagtacattgatgagctc
tcactggaaaaccctcttattgaacgaaaggaaacagacacaccgccactatcttaccat
aaaacaaacaaaaacaggatgaatgcacaggaagcgggccttcaattaagtgatccgcaa
aaaacattgcaggatgcgttaaaacagcagtcactcgatatgaatctgaccaacactgaa
aaaaagatttttaattatctgattcattcgcttgattcaaacgggtacttggaagaagat
gtggaggaggcagcacggcgcctatctgtatcggctaaggaaacggaggctgttttggca
aaactccagtcattagaaccggctggaattggcgcgagatctttgcaggaatgcatcctt
cttcaattacagcggctgccgaacagaaatgaacaagcggaaatgctggtttcagctcat
tttgatgcttttgcgcaaaaaaaatggaaagcgctttcagtggaggcaggaattccgctt
catactattcaagatatctcagatgatatcgcggctcttcatcctagacctggccttctg
tttgcccggccagagcaagatgtgtatattgagcctgacatttttatcaccgtaaaaaac
gggcacattgcagcggaactgaatacccgctcgtttcccgagatcgatctgcatccgcag
tacagaacgcttttatcatccggctcctgtcaggatactgtctcctatttatctgcgaaa
tatcaggagtggcgctggctgagccgcgcgctgcggcagcgaaaacagacaatcacgaga
attatcaatgaactgatcacacgccaaaaggatttctttctgaaagggcgaagcgcaatg
aagccgctgactctcagagaggtggcggactgtctaagccttcatgaatcaactgtgagc
cgggccattaaagggaaaacaatacaaacgccttacgggctgtttgagatgaaactcttt
ttctcagcaaaagccgaggcttcaggagagggagatgcgtcgaattatgcagtcaaaatg
catcttgaagacctgatcaatcaagaggacaaaacaaaaccgctttcagatcaaaagctt
gtcgatttgctgtatgaacaacacggcatccaaatctcgagacgcaccgtggcaaaatat
cgcgatcaaatgaatattccttcatcggcagcgagaaagcgatataaataa
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