Bacillus subtilis BSn5: BSn5_10580
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Entry
BSn5_10580 CDS
T01417
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsn
Bacillus subtilis BSn5
Pathway
bsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSn5_10580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsn03019
]
BSn5_10580
03009 Ribosome biogenesis [BR:
bsn03009
]
BSn5_10580
Enzymes [BR:
bsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSn5_10580
Messenger RNA biogenesis [BR:
bsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSn5_10580
Ribosome biogenesis [BR:
bsn03009
]
Prokaryotic type
rRNA helicases
BSn5_10580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADV94736
LinkDB
All DBs
Position
complement(2022843..2024282)
Genome browser
AA seq
479 aa
AA seq
DB search
MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPL
CELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQK
SHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTML
FSATLPQDIEKLSRQYMQKPEHIEIKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENP
DSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVA
ARGIDIENISLVINYDLPVEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLADIEEYIG
FEIQKIEAPSQEEVARKKPEFLAKMNDRPESKKDKSEELNKDIMKLYFNGGKKKKIRAVD
FVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKGKKLKVNKANK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattttaaaaactatcaaatcagtcatgacattttacgagcattggaaggactg
ggatatacagaaccgaccaaggtgcagcagagtgtgatccccgctgcccttgaacgaaag
gatcttgtcgtcaaatcacagacaggaagcgggaaaacggcttcgttcgggattcctctc
tgtgagctggcgaattgggatgaaaacaagccgcaggcgcttattttaacaccgacccgt
gagcttgcggtgcaagtaaaggaagatatcacgaacatcggacgatttaaacggatcaaa
gcgacagccgtatttggaaaatcctcctttgataaacaaaaagctgagcttaagcaaaaa
agccacattgttgtcggcacgccgggacgtgttctggatcatatcgaaaaaggcacgctg
ccgttggatcgtctctcttatttggtcattgatgaagcggatgagatgctgaatatgggc
ttcattgagcaggtggaggcgattatcaagcatctgccgactgagcgtacgacgatgctg
ttttcagcgacacttccgcaggatatcgagaagctgagccgtcaatatatgcaaaaaccg
gagcatatcgaaatcaaagcggccgggcttaccacaagaaatattgaacatgcggtgatt
caagtaagagaagagaataaattttcattgctgaaagatgtgctgatgacggagaatcct
gacagctgcatcattttctgccgaacgaaggagcacgtcaatcagctgaccgatgaattg
gatgacttaggatatccatgcgataaaattcacggcggaatgattcaggaagaccgattc
gacgtcatgaatgaatttaaacgtggcgagtaccgttacttagtggcgacggatgtcgcc
gcgcgcgggattgatattgaaaatatctcccttgtcatcaactatgatctgccggttgaa
aaagaaagctatgtccaccgcacgggccgaacgggacgcgcagggaacaaagggaaggcc
atttcgtttgtcacggcctttgaaaaacggtttttagccgacattgaagaatatatcgga
tttgaaattcaaaaaatagaagcaccttctcaagaggaagtagcaaggaaaaaacctgaa
tttctagctaaaatgaatgaccgtccggaaagcaaaaaagacaaaagcgaagagctgaat
aaagacattatgaagctgtattttaacggcggaaagaaaaagaaaatcagagccgttgat
tttgtaggaacgattgccaaaattgacggtgtgtcagctgacgacatcggcatcatcacg
atcatggataacgcctcatacgttgagattttaaatggtaaaggccctcatgttctcaaa
gtgatgaagaacacaaccgtcaaagggaaaaagctgaaggtgaataaagcgaataaatga
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