Burkholderia sola: ACVQKU_09545
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Entry
ACVQKU_09545 CDS
T11672
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bsoa Burkholderia sola
Pathway
bsoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACVQKU_09545 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsoa03021
]
ACVQKU_09545 (rho)
03019 Messenger RNA biogenesis [BR:
bsoa03019
]
ACVQKU_09545 (rho)
Transcription machinery [BR:
bsoa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACVQKU_09545 (rho)
Messenger RNA biogenesis [BR:
bsoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACVQKU_09545 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
YBO77305
LinkDB
All DBs
Position
1:2030611..2031873
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AA seq
420 aa
AA seq
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MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaactgatcgaaatggccaacggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagctgatgttcgccattctcaaa
aagcgcgccaagacgggagagacgatcttcggcgacggtacgctcgaagtactgccggac
ggcttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctat
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacaccatcgaaggtgaa
gtccgtacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgaacgcgagatgcgcggcgaggaaaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctcgtcgcgtcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcacacgcgatcaagcagaaccacccg
gacgtgatcctgttcgtgctgctgatcgacgagcgtccggaagaagtgaccgaaatgcaa
cgctcggtcgccggcgaagtgatcgcgtcgacgttcgacgaaccggccacgcgccacgtc
caggtcgccgaaatggtgatcgagaaggcgaagcgtctcgtcgaaatgaagcacgacgtc
gtgattctgctcgactcgatcacgcgtctcgcgcgtgcgtacaacaccgtgatcccggcg
tcgggcaaggtgctgacgggcggtgtcgacgcgaacgcgctgcagcgtccgaagcgcttc
ttcggcgcggcacgcaacatcgaggaaggcggctcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtgtacccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaggaaatgctgatcaagcccgagatcctgcaaaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggcgatggaattcctgctc
gacaagatccgccagacgaagagcaattccgagttcttcgacctgatgcgccgcggcggc
tga
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