Baekduia soli: FSW04_05860
Help
Entry
FSW04_05860 CDS
T06127
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsol
Baekduia soli
Pathway
bsol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSW04_05860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsol03019
]
FSW04_05860
03009 Ribosome biogenesis [BR:
bsol03009
]
FSW04_05860
Enzymes [BR:
bsol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FSW04_05860
Messenger RNA biogenesis [BR:
bsol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FSW04_05860
Ribosome biogenesis [BR:
bsol03009
]
Prokaryotic type
rRNA helicases
FSW04_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Phage_Mu_Gp45
HEM4
Cas3-like_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QEC47162
UniProt:
A0A5B8U2K8
LinkDB
All DBs
Position
1249784..1251205
Genome browser
AA seq
473 aa
AA seq
DB search
MTAFADLGLSEPTLQALQDVGYEQPSPIQEQAIPILLQGEDIIGQAQTGSGKTAAFGLPI
VEHVDPSVGEVQALVLTPTRELCIQVTQALRTYGARKGVDVVAVFGGAPIRSQQAQLRAG
GHVVVGTVGRVLDLLSRASLHLSDCRFVVLDEADEMLDLGFLEDVEKILKLCPNGRQTAL
FSATMPPPIRELADQYLYHPQTVKVKSANLTVDTVEQFRLEVKTADKADTLVDVLAQERP
DQAIVFTRTKIRADQLYRKLRDKGMNVKALHGDMSQGQRDGVMLSFKGGRVPILVATDVA
ARGLDISTVTHVVNFDVPASPDTYVHRIGRTGRVGRSGRAITFVEPRQQKELAAIETHVG
MPLTPWAPGAKTTPAKIEEPPKRHTKPQLSRNGAETYRRVLAAAGRADGIEVADVVHAVT
SAAGLDGEAVRDVHVLERFTLFSVPDSEADRIVQAVDGSELAGRALRVELARG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccttcgcggacctcggcctgagcgagccgaccctccaagccctccaggatgtc
ggatacgagcagcccagcccgatccaggagcaggccatcccgatcctcctccagggcgag
gacatcatcggccaggcccagacgggctccggcaagaccgccgccttcggcctgcccatc
gtcgagcacgtcgacccgtccgtcggcgaggtccaggcgctcgtcctgaccccgacgcgc
gagctgtgcatccaggtcacccaggcgctgcgcacctacggcgcgcgcaagggcgtcgac
gtcgtcgccgtcttcggcggcgcccccatccgcagtcagcaggcccagctgcgcgcgggc
ggccacgtcgtcgtcggcaccgtcggccgcgtgctcgacctcctgtcgcgcgcctcgctg
cacctgtcggactgccgcttcgtcgtcctcgacgaggccgacgagatgctcgacctcggc
ttcctggaggacgtcgagaagatcctcaagctctgccccaacggccgccagacggcgctg
ttcagcgcgaccatgccgccgccgatccgggagctggccgaccagtacctgtaccacccg
cagacggtgaaggtgaagtcggccaacctgacggtcgacaccgtcgagcagttccggctc
gaggtcaagacggccgacaaggccgacacgctcgtcgacgtcctcgcccaggagcgcccc
gaccaggccatcgtgttcacgcgcacgaagatccgcgccgatcagctgtaccgcaagctg
cgggacaaggggatgaacgtcaaggccctgcacggcgacatgagccagggccagcgcgac
ggcgtcatgctctcgttcaagggcggccgcgtgccgatcctcgtcgccaccgacgtcgcc
gcccgcgggctggacatctccacggtcacccacgtcgtcaacttcgacgtgccggcctcg
cccgacacctacgtgcaccgcatcgggcgcacgggccgcgtcggtcgctcgggccgcgcg
atcacgttcgtcgagccgcgccagcagaaggagctcgccgcgatcgagacgcacgtcggc
atgccgctgacgccgtgggcgccgggcgccaagacgacgcccgcgaagatcgaggagccg
cccaagcgccacaccaagccgcagctgtcgcgcaacggcgccgagacctaccgccgcgtg
ctcgccgccgccggccgcgccgacggcatcgaggtcgccgacgtggtccacgcggtgacg
agcgccgccggcctcgacggcgaggccgtccgcgacgtccacgtgctcgagcgcttcacg
ctgttctcggtccccgacagcgaggccgaccgcatcgtgcaggccgtcgacggcagcgag
ctcgccggccgggccctgcgcgtcgagctcgcccggggctga
DBGET
integrated database retrieval system
