Baekduia soli: FSW04_13795
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Entry
FSW04_13795 CDS
T06127
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bsol
Baekduia soli
Pathway
bsol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSW04_13795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsol03021
]
FSW04_13795
03019 Messenger RNA biogenesis [BR:
bsol03019
]
FSW04_13795
Transcription machinery [BR:
bsol03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FSW04_13795
Messenger RNA biogenesis [BR:
bsol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FSW04_13795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
Rho_N
ATP-synt_ab
AAA_22
OB_RNB
DUF6231
Motif
Other DBs
NCBI-ProteinID:
QEC48531
UniProt:
A0A5B8U6G9
LinkDB
All DBs
Position
2902383..2903801
Genome browser
AA seq
472 aa
AA seq
DB search
MSVLTRSALEASPLADLHTIASELGIDGFRRLRKAELVDRILGTQGGEDAVAEAEAPEAE
EAEVEEAVAADAEDKPRRRRGARGGRSRRRPGDDEDGSAEEADAEDAVADEPVAADDVIA
TEDEVVEEEIEEEEREAARPRRRSRGARDRDRGDGLNRDRDADRDRDAEDRVERVVSGVV
ELLPNGSGFVRVTPPEPSDDDVYVSAAQVRRCELVSGDRVAGPVREPRRSERYPSLVRID
TINDRPADEVAEGTHFDDLPCTLPTERLALGSEDATLKAIEWLTPIGKGSRVTITGEAHA
GKSEALKRLAGALNTVEGLEVHVVLAAVRPEECAEWRAGDVEPVAALSLAASPDAQAQAV
ERAIDTAKRITARGGDVVVLVDAIDGLPPHAARRALAAARNVVDGGSLTIIATAAAPVGG
ETTIIALDRTLTRTARFPALDLVNSGTLRAELLVGDAGADAIAQARAAALGA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgctcacccgctccgctctcgaggccagcccgctggccgatctgcacaccatc
gcgtccgagctcggcatcgacggcttccgccgactgcgcaaggccgagctcgtcgaccgc
atcctgggcacccagggcggcgaggacgccgtcgccgaggccgaggcgcccgaggccgag
gaggccgaggtcgaggaggccgtcgcggccgacgccgaggacaagccccgccgccgccgg
ggcgcccgcgggggccgcagccgccgcaggcccggcgacgacgaggacggaagcgccgag
gaggccgacgccgaggacgccgtcgccgacgagcccgtcgcggccgacgacgtcatcgcc
accgaggacgaggtcgtcgaggaggagatcgaggaggaggagcgcgaggccgcgcgcccc
cgtcgccgctcgcgcggcgcacgcgaccgtgaccgcggcgatggcctcaaccgggatcgc
gacgccgaccgtgaccgcgacgccgaggaccgcgtcgagcgcgtcgtctccggcgtcgtc
gagctgctgcccaacggctcgggcttcgtgcgcgtcacgccgccggagccctccgacgac
gacgtgtacgtctcggccgcccaggtgcgccgctgcgagctggtctccggcgaccgcgtc
gccggcccggtgcgcgagccgcgccgctccgagcgctacccgtcgctggtccgcatcgac
accatcaacgaccggcccgccgacgaggtcgccgagggcacgcacttcgacgacctgccc
tgcacgctgcccaccgagcgcctcgcgctggggtccgaggacgcgacgctgaaggccatc
gagtggctgacccccatcggcaagggctcgcgggtgacgatcaccggcgaggcccacgcc
ggcaagagcgaggcgctcaagcgcctggccggcgcgctgaacacggtcgagggcctcgag
gtccatgtcgtgctggccgccgtgcggccggaggagtgcgccgagtggcgcgcgggcgac
gtcgagccggtcgccgcgctgtcgctggccgccagccccgatgcccaggcccaggccgtc
gagcgcgcgatcgacaccgccaagcgcatcaccgcgcgcggcggcgacgtcgtcgtgctc
gtcgacgcgatcgacggcctgccgccgcacgcggcacgccgcgcgctggcggccgcccgc
aacgtggtcgacggcggctcgctgacgatcatcgccacggcggcggcccccgtcggcggc
gagacgacgatcatcgccctggaccgcacgctgacgcggaccgcgcgcttcccggcgctc
gacctggtcaacagcgggacgctgcgggccgagctgctcgtgggcgacgccggcgcagac
gccatcgcgcaggcgcgcgccgccgcgctgggcgcctag
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