Baekduia soli: FSW04_16085
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Entry
FSW04_16085 CDS
T06127
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bsol
Baekduia soli
Pathway
bsol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FSW04_16085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsol03400
]
FSW04_16085
Enzymes [BR:
bsol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FSW04_16085
DNA repair and recombination proteins [BR:
bsol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FSW04_16085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
SH3_13
OB_YrrC
AAA_11
HHH_5
AAA_22
Viral_helicase1
TraI_hel_assoc_N
PIF1
nSTAND3
Helicase_RecD
AAA_25
AAA_16
NPHP3_N
AAA
PhoH
TrwB_AAD_bind
SLFN-g3_helicase
Mg_chelatase
AAA_5
KTI12
Motif
Other DBs
NCBI-ProteinID:
QEC48941
UniProt:
A0A5B8U7M7
LinkDB
All DBs
Position
complement(3383047..3385155)
Genome browser
AA seq
702 aa
AA seq
DB search
MPEPTSLAAEIVAVRWRADDGGFAVLAALGDDGAELVLTGAIGHLHEGDTVEVDGTWRDH
PRFGRQLHVQHARIGPPASDDALRALLASVTHVGPRGAEWLVERHGDQVLEIVDRDPGAR
LREVPGIGRARLRAAVASWQEQAGGRALRLVLSEHGVPEAVAARVMKALGGGALALLESE
PYALARVEGIGFATADAVARALGTPADDPGRIDAGLHHALRAAEQDGHCFLGREELLARA
TRLLELPAPVVTARLPDAGLVLDGDRVIEPRMDRVERGLAERVLELAQAPPTLDVEVPEV
PDPDQEHPPTPTQWRAVQAAAEHRLSILTGLPGTGKTATMRALVDLLRAQRRTVRLCAPT
GKAARRLSETTGAEATTIHRLLEWSPGEGFLRDAGDPLTGVDLLVVDEASMLDVRLAAAL
LDAVGPRTHVLLVGDVDQLAPVGPGRVLEDLIASGVAPSTRLTEVFRQAARSLIIRAAHA
IDRGEAPPTRAQPDDLRDFFLVQRDSAQAVFDEVVSLAVGRLPAHYDLDPVADLQVLVPM
HRGPVGIDALNAELRERLNPDGRAVKGTAFRLGDRIMQTRNNHERAFYNGEIGVIVNDDP
GRGTLTLVGDDGRRLTLDRNETGTLRLAYACSVHKMQGSQAPAIVIALARGHAPMLTRNL
LYTAVTRSQTACVVVAEHGALEQALARVDASRRNTRLVGLLA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaacccaccagcctcgccgccgagatcgtcgcggtgcgctggcgggccgacgac
ggcgggttcgcggtgctggcggcgctgggcgacgacggggccgagctcgtgctcaccggg
gcgatcgggcacctccacgagggcgacacggtcgaggttgacgggacctggcgcgaccac
ccgcggttcgggcgccagctgcacgtccagcacgcccggatcggcccgccggccagcgac
gacgctctgcgcgccctgctggcctcggtcacgcacgtcggaccacgcggcgccgagtgg
ctcgtcgagcgccacggcgaccaggtgctcgagatcgtcgaccgcgacccgggcgcgcgc
ctgcgcgaggtccccgggatcggccgcgcccggctgcgcgccgccgtcgcctcctggcag
gagcaggccgggggccgcgccctgcggctcgtgctctccgagcacggcgtgcccgaggcc
gtcgccgcgcgcgtcatgaaggcgctgggcggcggcgccctggcgttgctggagtccgag
ccctacgcgctggcccgtgtcgagggcatcggcttcgccaccgccgacgcggtcgcccga
gctctcgggacgccggccgacgaccccgggcgcatcgacgcggggctgcaccacgcgctg
cgcgccgccgagcaggacggccactgcttcctggggcgcgaggagctcctggcccgcgcc
acgcggctgctcgagctgcccgcgccggtcgtgaccgcgcgcctgcccgacgccggcctg
gtcctcgacggcgaccgcgtgatcgagccgcggatggaccgggtcgagcgcgggctcgcc
gaacgcgtgctcgagctggcccaggccccgccgacgctggacgtcgaggtccccgaggtt
cccgatcccgaccaggagcacccgcccacccccacgcagtggcgtgccgtgcaggccgcc
gccgagcaccgcctgtccatcctcaccggcctgcccgggacgggcaagacggccacgatg
cgcgcgctcgtcgacctgctgcgcgcccagcggcgcacggtgcgcctgtgcgccccgacg
ggcaaggccgcgcggcgcctgagcgagacgacgggcgccgaggcgacgacgatccaccgg
ctgctggagtggtcgcccggcgagggcttcctgcgcgacgccggcgacccgctcaccggc
gtcgacctgctcgtcgtcgacgaggcctccatgctcgacgtgcgcctggccgcggcgctg
ctggacgcggtgggcccccgcacccacgtgctgctggtgggcgacgtcgaccagctggcg
cccgtcggccccggccgcgtgctcgaggacctcatcgcctccggcgtcgcgccgtccacg
cggctgaccgaggtcttccgccaggccgcgcgctcgctcatcatccgcgccgcccacgcc
atcgaccgcggcgaggccccgccgacgcgggcgcagcccgacgacctgcgcgacttcttc
ctcgtgcagcgcgacagcgcgcaggccgtcttcgacgaggtcgtctcgctggccgtcggc
cggctgccggcccactacgacctcgacccggtcgccgacctccaggtgctcgtgccgatg
caccgcggccccgtgggcatcgacgcgctcaacgccgaactgcgcgagcggctgaacccc
gacgggcgggcggtcaagggcaccgcgttccgcctcggcgaccgcatcatgcagacgcgc
aacaaccacgagcgcgcgttctacaacggcgagatcggcgtcatcgtcaacgacgatccg
ggacgcggcaccctgacgctggtcggcgacgacggccgccgcctgacgctggaccgcaac
gagaccggcacgctgcgcctggcctacgcctgctcggtccacaagatgcagggctcgcag
gcgccggcgatcgtcatcgcgctggcccgcggccacgcgccgatgctcacccgcaacctg
ctctacacggccgtgacgcgcagccagacggcctgtgtcgtggtggccgagcacggcgcg
ctggagcaggcgctggcacgcgtcgacgcatcgcggcgcaacacgcgcctcgtcgggctg
ctggcctga
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