Baekduia soli: FSW04_20405 Help Entry FSW04_20405       CDS       T06127                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism bsol  Baekduia soli Brite KEGG Orthology (KO) [BR:bsol00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bsol03019]     FSW04_20405 (hrpA) Enzymes [BR:bsol01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      FSW04_20405 (hrpA) Messenger RNA biogenesis [BR:bsol03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      FSW04_20405 (hrpA) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DUF3418 APHB_HrpA OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 WHD_HA2 AAA_19 nSTAND_NTPase5 T2SSE SLFN-g3_helicase NACHT nSTAND3 SRP54 Motif Other DBs NCBI-ProteinID:  QEC49704 UniProt:  A0A5B8U9G1 LinkDB All DBs Position 4212237..4216178 Genome browser AA seq 1313 aa AA seqDB search MSAPPAPAGELRPRLAALTLRDEHRLRRRLDRVRRTRDDDARTAALRRLEEEIGRAEAHV ARRRAAVPAVSYPPQLPVSARRDDLLAAIAGHQVVIVAGETGSGKTTQLPKMCLELGRGV RGTIAHTQPRRLAARTVAQRIADELEVALGEAVGYSVRFTDRSQQDTLVRLMTDGLLLAE VGRDPLLRRYDTIIIDEAHERSLNIDFLLGYLREILPRRPDLKVLITSATIDPERFSAHF GDAPIVEVSGRTFPVEVRYRPLAAAPAANDEDDVDGGGAQPDRDPTEAIGDAVDELLGDP AHPEGDVLVFLSGEREIRDTADALAGRLPDDVEILPLYARLSAAEQQRAFTAHRGRRVVL ATNVAETSVTVPGIRYVVDPGTARISRYSARLKVQRLPIEPVSQASADQRKGRCGRTADG ICIRLYSEEDFAGRPRYTDPEILRTNLAAVILQMAALGLGEIEDFGFLDPPDARQIRDGV NLLVELGALDPRATDPAQRLTDVGRRLSRLPVDPRLGRMVLEADARSCADEVIVIAAALS IQDPRERPADQRAQADQLHARFRDDTSDFLAFVNLWRHLHEQRRELSGNQFRKRLKAEYL HYLRVREWQDLASQLRSAAREAGVRLNRTPAEPADIHVALLAGLLSHVGVRDAAGREYLG ARGARFVLSPGSALARRGPAWVMVSELVETNRLYGHTAAAIRPEWIEPLAAHLVKRSYGE PRWEKRRASVVATERVTLYGLPIVTGRTVGYGDIDPGLSRDLFLRRALVERDWDTRHRFF ADNGRLLEEVEALEHRVRRRDILVDDATLYAFFDARIPASVVSGAHFDRWWKDERRRSPN LLTFTRELLVGDPEAATGGGRPQRWRQGELSMPLSYTFAPGTDADGVTVHVPLKGLPQLR AEDFAWQVPALREELVTALLRTLPKELRRPLVPLPDVAAELLARLQPRAEPLPEALSREL LALRGVRVAPGDWDLDRLPAHLRMRFRVEDEEGRVQGEGTDLGALRAALAPRLRAELTAA VPGLERHGLRAWELGDLPREVTLPGTGRAVRAFPALVDEGDAVGVRLLDSAPAQEQAMAA GTRRLLLLTVPSPARWVLGRLPGPRQLALSDAPHGSPAAVLADATAAAVDALVAQAGGPA WDAGGFARLRDHVAGGLAEATLEVVEQVAAILDARREVQRAAEGLTAAVYEPARLDVARQ TGGLVFDGFITATGAARLPDVLRYLQGAVRRMQRLPDAVAVDRDRMAGVQELEQRRREVA ARWRGRATPPALEQARWMLEELRMSHFAQGLGVHGQVSAKRVRRLLDEAAAAA NT seq 3942 nt NT seq  +upstreamnt  +downstreamnt atgtccgccccgccggcgccggccggcgagctgcgcccgcggctcgccgccctcaccctc cgcgacgagcaccgcctccggcggcgcctggaccgcgtgcgccgcacccgcgacgacgac gcccggacggccgcgctgcgccgcctggaggaggagatcgggcgcgcggaggcccacgtg gcccggcgccgcgccgccgtccccgcggtcagctacccgccccagctgccggtcagcgcg cgccgtgacgacctgctcgcggcgatcgccggccaccaggtcgtcatcgtcgccggcgag acgggctcgggcaagacgacgcagctgccgaagatgtgcctcgagctcgggcgcggcgtg cgcggcacgatcgcccacacccagccgcgccggctggcggcgcgcaccgtggcccagcgc atcgccgacgagctggaggtggcgctcggcgaggccgtcggctactccgtgcgcttcacc gaccgctcgcagcaggacacgctggtgcggctgatgaccgacggcctgctgctggccgag gtcggccgcgacccgctcctgcgccgctacgacaccatcatcatcgacgaggcccacgag cgcagcctcaacatcgacttcctgctgggctacctgcgcgagatcctgccccggcgcccc gacctcaaggtgctcatcacgtcggcgacgatcgaccccgagcgcttcagcgcgcacttc ggcgacgcgccgatcgtcgaggtctccggccgcaccttccccgtcgaggtccgctaccgc ccgctggcggccgcgccggccgccaacgacgaggacgacgtcgacggcggcggcgcgcag cccgaccgcgacccgacggaggcgatcggcgacgccgtcgacgagctgctcggcgacccc gcccaccccgagggcgacgtcctggtcttcctcagcggcgagcgcgagatccgcgacacg gccgacgcgctggccggccgcctgcccgacgacgtcgagatcctccccctctacgcccgg ctgtcggccgccgagcagcagcgcgcgttcaccgcccaccgcggccggcgcgtcgtcctg gccaccaacgtcgccgagacgtcggtcaccgtgccgggcatccgctacgtcgtcgatccc ggcacggcgcggatcagccgctacagcgcgcggctcaaggtccagcggctgccgatcgag ccggtctcgcaggcctcggccgaccagcgcaagggccgctgcgggcgcacggccgacggg atctgcatccggctgtactccgaggaggacttcgccggccgcccgcgctacaccgacccc gagatcctgcgcacgaacctcgccgcggtcatcctgcagatggccgcgctgggcctcggg gagatcgaggacttcgggttcctggacccgcccgacgcccgccagatccgcgacggggtc aacctgctggtcgagctcggcgcgctggacccgcgggcgaccgacccggcgcagcggctg accgacgtcggccgtcgcctgtctcgcctgcccgtcgacccgcggctgggccgcatggtc ctggaggccgacgcccgctcgtgcgccgacgaggtcatcgtcatcgccgcggcgctgtcg atccaggacccgcgcgagcgcccggccgaccagcgcgcgcaggccgaccagctccacgcg cgcttcagggacgacacctcggacttcctggccttcgtcaacctgtggcgccacctgcac gagcagcggcgtgagctgtccggcaaccagttccgcaagcggttgaaggccgagtacctg cactacctgcgcgtgcgcgagtggcaggacctcgcctcgcagcttcggtcggccgcgcgc gaggcgggcgtgcggctcaaccgcacgccggccgagcccgccgacatccacgtcgccctg ctcgccgggctgctctcgcacgtcggggtgcgcgacgccgcggggcgcgagtacctcggc gcccgcggcgcgcgcttcgtcctctcccccggctcggcgctcgcgcggcgcgggccggcc tgggtcatggtctccgagctggtggagaccaaccgcttgtacggccacacggccgcagcc atccggccggagtggatcgagccgctggccgcccacctcgtcaagcgctcgtacggcgag ccgcgctgggagaagcggcgcgcgtcggtcgtggcgaccgagcgcgtcaccctctacggg ctgccgatcgtcacggggcgcacggtgggctacggcgacatcgaccccggcctctcgcgc gacctgttcctccgccgggcgctggtcgagcgcgactgggacacccgccaccgcttcttc gccgacaacggacggctgctggaggaggtcgaggcgctcgagcaccgcgtgcgccgccgc gacatcctcgtcgacgacgccacgctgtacgcgttcttcgacgcgcggatcccggcctcg gtcgtctccggcgcgcacttcgaccgctggtggaaggacgagcggcgccgctccccgaac ctgctgacgttcacgcgcgagctgctcgtcggcgacccggaggcggcgacgggcggcggg cgcccgcagcgctggcgccagggcgagctgtccatgccattgtcctacaccttcgcgccg gggaccgacgccgacggcgtcaccgtccacgtgccgctcaaggggctgccgcagctgcgc gccgaggacttcgcctggcaggtgcccgcgctgcgggaggagctcgtcaccgcgctgctg cgcacgctgcccaaggagctgcgccgcccgctcgtgccgctgcccgacgtggccgccgag ctgctcgcccgcctccaaccccgcgccgagccgctgcccgaggcgctcagccgcgagctg ctggcgctgcgcggcgtgcgcgtcgcgcccggcgactgggacctggaccgcctgcccgcc cacctgcggatgcgcttccgcgtcgaggacgaggaaggccgcgtgcagggcgagggcacc gacctcggcgcgctgcgcgccgcgctggcgccccggctgcgcgccgagctgacggcggcg gtgcccgggctggaacgccacggcctgcgggcctgggagctcggcgacctgccccgggag gtcacgctgccggggaccgggcgcgccgtgcgggcgttcccggccctggtcgacgagggc gacgcggtcggcgtgcgcctgctcgacagcgcccccgcccaggagcaggcgatggccgcc ggcacccggcgcctgctgctgctcacggtcccgtcgcccgcgcgctgggtcctgggccgg ctgccgggcccgcggcagctcgcgctgtccgacgcgccgcacggctcccccgccgccgtc ctggccgacgccacggcggcggccgtcgacgcgctcgtcgcgcaggccggcggcccggcc tgggacgccggcggcttcgcgcgcctgcgcgaccacgtcgccggcgggctggccgaggcg acgctggaggtcgtcgagcaggtcgccgccatcctcgacgcccggcgcgaggtgcagcgc gcggccgaggggctgaccgccgcggtctacgagcccgcccggctcgacgtcgcgcggcag accggtggcctggtcttcgacgggttcatcacggccacgggcgccgcgcggctgcccgac gtcctgcgctacctgcagggcgccgtgcgccggatgcagcggctgcccgacgccgtcgcg gtcgaccgcgaccggatggcgggcgtccaggagctcgagcagcgccgccgcgaggtggcg gcgcggtggcgcgggcgcgccacgccgccggcactggagcaggcgcgctggatgctcgag gagctgcggatgagccacttcgcccagggcctcggcgtgcacggccaggtctcggccaag cgggtgcgccgcctcctggacgaggccgccgccgcggcctga

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