KEGG   Bacillus sonorensis: S101395_00140
Entry
S101395_00140     CDS       T06571                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bson  Bacillus sonorensis
Pathway
bson03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bson00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    S101395_00140 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bson03021]
    S101395_00140 (rpoC)
   03400 DNA repair and recombination proteins [BR:bson03400]
    S101395_00140 (rpoC)
Enzymes [BR:bson01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     S101395_00140 (rpoC)
Transcription machinery [BR:bson03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     S101395_00140 (rpoC)
DNA repair and recombination proteins [BR:bson03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      S101395_00140 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 Peptidase_M23 RPOC_hybrid Apocytochr_F_C
Other DBs
NCBI-ProteinID: ASB86700
LinkDB
Position
130089..133688
AA seq 1199 aa
MLDVNNFEYMNIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAIHKLLQ
DIDLDKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERPGAVGEGMIFKDTDEALLAYQNGYVHLHTRVAVA
VNSLKNETFTEEQRSKLLITTVGKLIFNEILPPSFPYMNEPTKSNIEEKTPDRFFVDYGV
DVKEAIRNQEINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLDDKQEILEEAQGKVDNVMKQFRRGLITEEERYERVISIWSAAKDTIQGKLMKSL
DEINPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKAITEGTEVIERLE
ERLVGRFARKPVKHPETGEILVKENELIDEDKAIEIVEAGIEEVWIRSAFTCNTSHGVCK
RCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATISEIDGVVAEINEVRDKQQEIVVQGEVETRSYTAPYNARLKVAEGDKISR
GQVLTEGSVDPKELLKVTDITTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTQANKKVLLEGKRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMLNYRKVKPVLQVKSSEEMVPAE
NT seq 3600 nt   +upstreamnt  +downstreamnt
ttgctggatgtgaacaattttgagtatatgaacatcggtctcgcttcacctgataaaatc
cgttcatggtcttacggagaagtgaaaaagcctgaaacaatcaactatcgtactttgaaa
cctgaaaaagatggtctgttctgcgagcgcattttcggtcctcaaaaggactgggaatgc
cattgcggaaagtacaagcgagttcgttataaaggcgtagtttgcgaccgttgtggagtt
gaagtaacccgggctaaagtccgtcgtgagagaatggggcatatcgaactggcagccccg
gtttctcacatctggtattttaaaggaattccaagccgtatgggtcttgtgctggatatg
tctccgcgtgcattggaagaagtcatctactttgcttcttatgtcgtaacagatccggca
aacacgccgcttgagaaaaagcagcttctttctgaaaaagaataccgtgcgtaccttgat
aaatacggcaataaatttcaagcttccatgggggctgaagcgattcataagctccttcag
gatatcgatcttgataaagaagtcgatatgctcaaggaagagctgaaaacgtcacagggg
cagcgtcgtacacgtgcgatcaagcgtcttgaagtgttggaagcattccgtaattccgga
aataaaccgtcttggatgatccttgatgttcttccggttattcctcctgagctgagacca
atggtacagcttgatggcggacgttttgcgacttccgaccttaacgatttgtaccgccgc
gtgatcaaccgtaacaatcgcttgaaacgcctgctcgatcttggagccccaagcatcatc
gttcaaaacgaaaagcggatgcttcaagaagccgttgacgcattaatcgataacggacgc
agaggccgtccggttacgggtcctggaaacaggccgctaaaatccctttcccacatgctg
aaaggtaaacaaggccgtttccgtcaaaaccttctcggtaagcgtgttgactattcagga
cgttcggttatcgtcgttggtccgaacctgaaaatgtaccaatgcggccttccgaaagaa
atggctttggaactgttcaagcctttcgtcatgaaagagcttgttgaaaaaggtcttgct
cataacattaagagtgcgaagcgtaaaattgaacgcgttcagcctgaagtttgggatgtt
cttgagtcagttatcaaggagcacccggttcttctcaaccgtgcacctacgcttcacaga
ctcggaatccaggcatttgagcctacgcttgttgaaggccgtgccatccgtcttcacccg
ctcgtatgtacggcatacaacgccgactttgacggtgaccaaatggcggttcacgttcct
ttatcagcagaggcgcaagctgaagcgcgcattctcatgcttgctgcgcaaaacatctta
aaccctaaagacggaaaaccggttgttacgccgtctcaggacatggttcttggaaactac
tacctcacgcttgaacggccaggcgctgtcggcgaaggtatgattttcaaagatacggat
gaagcgctgcttgcatatcaaaacggatatgttcatctgcatacaagagtggccgttgcg
gtcaactccttgaaaaatgaaacattcacggaagaacagcgttccaaactgctgatcaca
acagtcggtaagctgatcttcaacgaaattcttccgccatcgttcccgtacatgaacgaa
ccgacgaagagcaacatcgaagaaaaaacgcctgaccgtttcttcgtggattacggcgtc
gatgtaaaagaggcaatccgaaaccaagaaatcaatgcgccgttcaaaaaaggcattttg
ggtaaaatcattgcggagatcttcaaaagattccacattaccgaaacgtccaaaatgctt
gaccgcatgaaaaacctcggctttaaatattcaacaaaagccggaattacggtcggtgtt
tctgatatcgtcgttttggatgataagcaggaaattcttgaagaagcacaaggaaaagtc
gataatgtcatgaaacagttcagacgcggtctgattactgaagaagagcgttatgaacgc
gtcatttccatctggagcgccgctaaagataccattcaaggcaagctgatgaaatccttg
gatgaaatcaacccgatctacatgatgagtgactctggagcccggggtaacgcgtcaaac
tttacacagcttgcaggaatgcgcggtctgatggccaacccggccggacggattatcgag
cttccgatcaaatcaagcttccgcgaaggtttaacagtgttggagtactttatctccacc
cacggtgcgcgtaaaggtcttgccgacacagccctgaaaacggctgactcaggttacttg
acacgccgtctcgtagacgtggctcaggatgtcatcattcgtgagacagattgcggtact
gaccgcggtattctggcgaaagccatcactgaaggcactgaagtgatcgagcgtcttgaa
gaacgtctcgtcggccgctttgcaagaaaacctgtgaaacatcctgaaacgggagaaatc
cttgttaaagaaaatgaactgatcgacgaagacaaagcgatcgaaattgtcgaagcaggc
attgaagaagtgtggatccgctccgcatttacatgtaatacgtcgcacggagtatgcaaa
cgatgctacggccgcaacctggcgactggaaccgatgttgaagtcggggaagcagtcgga
atcatcgccgcccagtctatcggtgagccgggtactcagttaacaatgcgtaccttccac
acaggcggggttgccggagacgatattacacaaggtttgccgcgtattcaggaattgttc
gaagcgcgtaatcctaaaggccaggcgacgatctccgaaattgacggtgtcgtagccgaa
atcaatgaagtgcgcgataagcagcaggaaatcgtcgttcagggtgaagttgaaacccgc
tcctacacggcgccttacaacgcccgcctgaaagtggcagaaggcgataagatttcccgc
ggtcaagtcctgacagaaggttcggttgatccgaaagagcttctgaaagtaacggacatc
acaaccgttcaggaatatcttctgcatgaggtgcagaaggtttaccgcatgcagggtgtt
gaaatcggggataaacacgtcgaggttatggttcgccagatgcttcgcaaagttcgtgtc
atcgatgccggcgacacagacgtgctgcctggcacattgctcgacattcaccagtttact
caagcaaacaaaaaagtgctgcttgaaggaaaacgacctgcgacaggccgtccggtgctt
ctcggtatcacaaaagcatcacttgaaacagattccttcctgtctgccgcatcattccag
gagacaacacgtgtcctgacagatgcagcgatcaaaggaaaacgagatgagcttctcggt
ctgaaagagaatgtcattatcggtaagcttgttccggctggaacaggtatgctgaactac
cgtaaagtgaagccggtgctgcaagtcaaatcttccgaagaaatggttccggcagaatag

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