Bacillus sonorensis: S101395_01619
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Entry
S101395_01619 CDS
T06571
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bson
Bacillus sonorensis
Pathway
bson03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bson00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
S101395_01619 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bson03400
]
S101395_01619 (recD)
Enzymes [BR:
bson01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
S101395_01619 (recD)
DNA repair and recombination proteins [BR:
bson03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
S101395_01619 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
HHH_5
AAA_12
AAA_16
UvrD_C
T2SSE
nSTAND3
DUF4926
AAA
NPHP3_N
TsaE
Rad17
NTPase_1
AAA_28
AAA_17
AAA_5
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ASB88128
UniProt:
A0ABN5AG65
LinkDB
All DBs
Position
1497877..1500273
Genome browser
AA seq
798 aa
AA seq
DB search
MKHQHPDQIQMEEASFLKGTVTAVIYHNETNLYTVLKVKVQETSESFDEKTVSVTGYFPA
IFEDETYTFYGKTASHPKFGLQFQADHFKKEVPTTKEGVIQYLSSDLFEGIGKKTAEEIV
KKLGEGAINKILGDASVLYDVPKLSKKKADKLAALLQQHQGLEQIMISLSEFGFGPQLSM
KIYQVYESETLDKIRENPYQLVKDVEGIGFIKADELGGRMGISGRHAERIKAAILYTVEA
TCLQEGHTYIETKQLIIETQKLLNQSSDEEKVTEMDVADAIISLGEQKDLFIEDDRCYYP
SLYYAEQSFAKRVQTIAEQTEYDDQFPESEFLLALGELEERMQVQYAPSQKEAIQKALMS
PMLLLTGGPGTGKTTVIRGIVELYSELHGLSLNPADYKKDETFPFVLAAPTGRAAKRMSE
STGLPAVTIHRLLGWNGAEGFTHDEDNPIDGRLLIVDETSMLDIWLANQLFKAIPNRIQV
IMVGDEDQLPSVGPGQVLRDLLASNLIPSVRLTDIYRQAEGSSIVELAHDMKKGRLPENL
TAPTKDRSFIRCRQQQIKEVVEKVVKNALQKGYSARDIQVLAPMYRGPAGINELNALLQD
ILNPPKPKGRELKYGDVVYRTGDKVLQLVNQPEHHVFNGDMGEIVSIFYAKENTEKEDMA
VVSFDGNEITITKKDFNQFTHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAIT
RSKKFLILCGEEEALEWGIKNRESSERQTSLQRRLHQAVHEEDEELLALQKELPFSVYDA
NIGMEGITPFDFMEKEAE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacatcaacatcctgaccaaattcaaatggaagaagcatcctttctgaaaggaacg
gtaacggccgtcatctatcataatgaaacaaacctctataccgtactgaaagtgaaggtt
caggaaacatctgaatcatttgatgaaaaaaccgtttctgtcacagggtactttccggca
atctttgaagatgaaacgtatactttctacggaaaaaccgcctcccatccgaagtttggc
ctgcaatttcaagcagatcattttaaaaaagaagttccgacgacaaaagaaggcgtcatc
caatatttgtcgagcgacctatttgaaggcatcggcaaaaaaacggcggaagaaatcgtc
aaaaagctcggggaaggcgcgatcaacaagattttgggagacgcttccgtgctttatgat
gtgccaaagctttcaaagaaaaaagcggataagcttgccgctcttcttcagcagcatcag
gggcttgagcagatcatgatttccttgagcgagtttggcttcgggccgcagctgtccatg
aaaatttatcaagtatatgaatcggaaacgctggataaaatccgtgaaaatccgtatcag
ctcgtcaaggatgtcgaaggaatcggctttattaaagcggatgaactcggcggcagaatg
gggatttccggcaggcatgcggaacggatcaaagcggcgattttatatacggttgaagcg
acatgccttcaggaagggcatacttacatagaaacaaaacagctcattatcgagacgcag
aagctgctgaaccagtcgtctgacgaagaaaaagtcacggaaatggatgtggcggatgcg
atcatttccctaggtgaacagaaagatctgtttattgaagacgacaggtgctattatccg
tcgctttactatgctgaacaaagctttgccaaaagagtccagacgatcgcggaacaaacc
gaatacgatgaccagtttcccgaatcggaatttttgcttgctttaggcgagcttgaagaa
cgaatgcaagtccaatacgcgccaagccaaaaagaagccattcaaaaagcgctgatgtcc
ccgatgctgcttttgaccggaggacccggcacgggaaaaacgacagtcatcaggggaatc
gtcgaattgtacagcgagctgcacggtttaagtttaaatccggctgattataaaaaggat
gaaacctttccgtttgtactggctgcgccgacgggtagagcggccaagcggatgagcgaa
tcgacgggtcttcccgctgtgacgatccacaggctcctcggctggaacggagcggaaggt
tttacacatgacgaagataacccgatcgatgggcggctgctgattgtcgatgagacgagc
atgcttgatatatggcttgccaaccaattattcaaagcgattccaaaccggattcaggtt
atcatggtgggagatgaagaccagctcccgtctgtcggaccgggacaggtgctcagggat
ctccttgcatcaaatctcattccctcggtcagattaaccgatatttaccggcaggcagaa
ggctcttcaatcgtggaattggcgcatgatatgaaaaaggggaggctgccggaaaatttg
acggccccgactaaagaccgctcatttatccgctgccgtcagcagcaaattaaagaagtg
gttgaaaaagtcgtcaaaaacgcattgcaaaagggctattccgcccgggacattcaagtg
cttgccccgatgtacaggggtccggcgggaatcaatgaattaaatgcgcttttgcaggac
atcctcaatccgccaaaaccaaaaggcagggagctaaagtacggggatgtcgtctacagg
acgggcgacaaggtgctccagcttgtcaatcagcctgagcatcatgtgttcaacggtgat
atgggcgaaattgtttctattttttacgcgaaggaaaatacggaaaaagaagacatggct
gtcgtttcttttgacggcaacgagatcacaattacaaaaaaagatttcaatcagtttaca
catgcttactgctgttcgattcacaaatcgcagggcagcgaatttccgattgtcattctt
cccgtcgtcaaaagctattaccggatgctgagaagaaatttgctttatacggccattaca
agaagcaaaaaatttctcattttgtgcggtgaagaggaagcgcttgaatggggcataaaa
aatagagaatcctctgaaaggcagacatctttgcagagaaggctgcatcaggcggtacat
gaagaggacgaggagctgctggcgctccaaaaagaactgcctttcagcgtgtatgacgcc
aacatcggtatggaaggcatcacaccttttgactttatggaaaaagaggcggaataa
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