Bacillus sonorensis: S101395_03049
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Entry
S101395_03049 CDS
T06571
Name
(GenBank) Ribonuclease J2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bson
Bacillus sonorensis
Pathway
bson03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bson00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S101395_03049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bson03019
]
S101395_03049
Messenger RNA biogenesis [BR:
bson03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
S101395_03049
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ASB89556
UniProt:
A0ABN5AFQ7
LinkDB
All DBs
Position
complement(2857132..2858796)
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AA seq
554 aa
AA seq
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MKKNTENIRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYLI
ERSDRVKAIFLTHGHEENIGGVFYCLNKLSVPVYGTKLTLALLKETLKQYGSNKKADLRE
IHSKSVITFDSTKVSFFKTNHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPVLNQTSDIGE
IAKIGNSGVLCLLSDSANAEKPGYTPSEAVVGGDISDVMYNAENRVIVAVFASNFNRIQQ
VIDAARQNGRKLAVSGKNISSILQLAIKLGYVTADEDMFIPVQDVKKHPKREVAILTGDN
HGEPLAALTRIAKQGHKQLDIEEGDTVLIASSPIPGQELVYSKAVDLLTRAGAHVVFAQK
RVHVSGHGCQEELKLMLNLLKPKYLIPVNGEFRMQKAHSKLAEEIGMKRSDIFLVEKGDV
VEFRGQNVKIGDKVQSGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKKKKHLV
SGPEIITRGFVYVRESEELIVEATELVRNIVTESTENAVVEWSALKQTMRDALNQFLYEK
TKRKPMIIPIIMEV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaaatacagaaaatattagaatcatcgccttgggaggcgtcggggagatcgga
aaaaacctttatgtcattgaaatcgactctgacatattcgtggttgatgccggactcatg
catccagaaaatgaaatgctggggatcgatgtggtcataccggacatttcatatttgatt
gaacgatctgaccgagtaaaggcgattttcctcacacacggacacgaagaaaacatcgga
ggcgttttttactgcctgaacaagctatctgtgcctgtttacggaacaaaactgacactt
gcccttttaaaagaaacgctgaagcagtacggctcaaataaaaaagccgatttacgggaa
atccactccaaatccgtgattacatttgattcaacgaaagtgtcatttttcaagacaaac
cacagcatcccggattccgtcggggtcagctttaaaacgtccctcggatcaatcgtgtgc
accggcgattttaaatttgaccaaacgccggttttaaatcagaccagcgatattggcgaa
attgccaaaatcggcaacagcggcgttctatgcctgctttcagacagcgccaacgctgaa
aagccgggctatacgccttcagaagcggtcgtcggaggcgacatttccgatgtgatgtac
aatgcggaaaaccgtgtgatcgttgccgttttcgcctcaaactttaacaggattcagcag
gtgattgatgcggcccgccaaaacggcaggaaattggccgtatcaggaaaaaatatatct
tccatccttcagctggccattaagctcggctatgtgaccgctgatgaggacatgttcatc
cctgtccaggatgtcaaaaagcatccaaaaagggaagtcgctattttgacgggagacaac
catggtgaacccctggccgctttgacaagaattgcaaagcaagggcataaacagcttgac
attgaagaaggcgacactgtcctgattgcctcctccccaataccggggcaggaattggta
tattcaaaggccgttgatcttttgacaagagcaggcgcccatgtcgtatttgcgcaaaaa
cgcgtccacgtttcagggcatggctgccaggaagaactgaagctgatgctgaatctgctg
aagccgaaatatttaatccctgtaaacggcgaattcagaatgcaaaaagcccattcaaag
cttgccgaagaaatcggaatgaaacgaagcgacatctttctggttgaaaaaggcgatgtc
gttgagttccgcggtcaaaatgtcaaaatcggcgataaggttcagtcgggcaacattctg
atcgacggcctaggtgtcggcgacatcggcaacatcgtgctcagagatcggcgcctcctt
tcccaggacggaattttaatcgttgttattacccttgataaaaagaaaaaacatcttgta
tcaggacccgaaattatcacgagaggttttgtttacgtcagggaatccgaagagctgatc
gtagaggcgaccgaactggtcagaaatatcgtcacagaaagcacagaaaatgccgttgtc
gagtggtctgccttaaagcaaaccatgcgggacgcgttaaaccaattcttatacgaaaaa
acgaaacgaaaaccaatgatcatcccaatcatcatggaagtataa
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