Bacillus sonorensis: S101395_04464
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Entry
S101395_04464 CDS
T06571
Symbol
deaD
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bson
Bacillus sonorensis
Pathway
bson03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bson00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S101395_04464 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bson03019
]
S101395_04464 (deaD)
03009 Ribosome biogenesis [BR:
bson03009
]
S101395_04464 (deaD)
Enzymes [BR:
bson01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
S101395_04464 (deaD)
Messenger RNA biogenesis [BR:
bson03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
S101395_04464 (deaD)
Ribosome biogenesis [BR:
bson03009
]
Prokaryotic type
rRNA helicases
S101395_04464 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
NAT10_TcmA_helicase
DD_DDX21-DDX50
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ASB90952
UniProt:
A0ABN5ARF8
LinkDB
All DBs
Position
complement(4189922..4191385)
Genome browser
AA seq
487 aa
AA seq
DB search
MTITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIP
LVEKIDPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKK
NPHIIVGTPGRLIDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPEDHQTL
LFSATMPAPIKRIAERFMNNPEHIKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQS
PELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTT
KRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEDNNLNFYMSAAAELLEDHDAVTVVAAAI
KMMTKEPDNTPVRLTEEAPLRTKRNKNHRSTKRRDGGGYRGKGKNTRSSYDKKRSSSDRR
QKKSYNS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgactataacgtttcaagattttcaattaagttctgatctcacaaaagcgattaagcgc
atgggatttgaagaagcaacaccgatccaggcgcaaacgattccgcttggtcttgcaaat
aaagatgtgatcggacaagcacaaacgggaacaggaaaaacggctgcatttggcatcccc
cttgttgagaaaatcgaccccgagtctcctaacattcaagccattgttatcgcacctact
cgagaattagccattcaagtttctgaagagctatataaaatcggacaggataaacgcgcg
cgggttcttcctatttacggaggccaggatatcggccgccagattcgcgcattaaagaaa
aatccccacattatcgttggaactccaggccgtctgattgaccatatcaaccgtcgcacg
atgcgccttcaaacggtgaacaccgttgtcctcgacgaagcggatgaaatgctgaacatg
ggatttatcgaagatatcgaatccattctttccaatgtgcctgaagaccatcagacactg
ctgttttcggcaacaatgcctgcgccgattaagcggattgccgaacgctttatgaacaac
ccggagcacattaaagtaaaagcaaaggaaatgacggtgtcaaacatccagcaattctat
cttgaagtgcatgagcgcaaaaagtttgatacgctgacgcgtcttcttgacatccagtct
cctgagcttgcgatcgtattcggccgcacgaagcgccgtgtcgatgaactgacggaagcg
ttgaatctgcgcggctatacggctgaaggaatccatggagatttgacacaggcgaagcgt
atggtggctctccgcaaattcaagcaaggcgcaattgaagtgcttgtggcgacagacgtt
gcagcccgcggcttggacatttccggagtcacgcacgtttataactttgatgttcctcag
gatccggaaagctatgttcaccgcatcggaagaacgggacgtgccggcaagaccggaatg
gcgatgacattcatcactccgcgtgaaaaggacatgctgcgcgcgattgaacaaacgaca
aaacgcaaaatggaccgcatgaaagcgccgactcttgacgaggcgattgaagggcagcag
caggtaacggttgaccgcatccggacgattattgaagacaacaatcttaacttttatatg
tccgctgcagctgaactgctggaagaccatgacgctgttacagtcgtagcggctgccatt
aaaatgatgacaaaagagccggataatacacctgtacgcttgacagaagaagcaccgctc
agaacgaagcggaataaaaaccaccgctcaacaaaacgcagagatggcggcggatacaga
ggaaaaggaaagaacacgcgttcgtcctatgataaaaagcgttcttcaagtgacagacgc
caaaaaaaatcctataattcataa
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