Bacillus subtilis PY79: U712_11175
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Entry
U712_11175 CDS
T02937
Name
(GenBank) putative ATP-dependent DNA helicase recS
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsp
Bacillus subtilis PY79
Pathway
bsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U712_11175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsp03019
]
U712_11175
03400 DNA repair and recombination proteins [BR:
bsp03400
]
U712_11175
Enzymes [BR:
bsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U712_11175
Messenger RNA biogenesis [BR:
bsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U712_11175
DNA repair and recombination proteins [BR:
bsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U712_11175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
DUF6119
Motif
Other DBs
NCBI-ProteinID:
AHA78178
LinkDB
All DBs
Position
complement(2224790..2226280)
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AA seq
496 aa
AA seq
DB search
MTKLQQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVL
IVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVLEHIHRYKFLYLSPEALQSPY
VLEKLKSVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKKLGHPPVLALTATATKETLQ
DVMNLLELQHAVRHLNSVNRPNIALRVENAADTAEKIDRVIQLVENLQGPGIVYCPTRKW
AKELAGEIKSKTSSRADFYHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRY
VIHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVTAEEIADVIR
VLEKTEERDERRLRDVLLQYGVGETQARMMIHLFMQGKTSVELMKKEISYRMELKLEKMH
RVSFLLQRDGCLRQALLTYFDESYEPDDGNLPCCSHCGFDLSLYEQKGERSKMAPLDSWS
SELHRIFSLQTVGELN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattacagcaaacgttatatcagttttttggttttacttcctttaaaaaaggg
cagcaggacattattgaaagcatactcagcgggaaggataccattgcaatgctcccgact
gggggagggaaatcgctttgctaccagctgcctggttatatgcttgatggcatggtatta
atcgtttctccactgctttctttaatggaggatcaggtgcagcagctcaaagcccggggg
gaaaagcgtgctgcagctttgaacagcatgcttaacaggcaggaaagacaatttgtttta
gaacatattcatcgatataaatttttgtacttgtctcctgaagctttacagtctccatat
gtattggaaaaattgaaaagcgttccgattagcctatttgttattgacgaagcgcattgt
atttctgaatggggacacgacttcaggcctgattattcaaagctcggacagctgagaaaa
aaacttggacacccacccgttctggcattgaccgccacggctacaaaggaaacgctgcaa
gatgtcatgaacctgctggagctgcagcatgctgtacgccatctcaactcagtcaaccgc
ccaaacatcgcactgagggttgaaaatgcggcggatactgccgaaaaaatagatagggtc
attcagctggttgaaaacctgcaaggtccgggaattgtttattgtccaacacggaaatgg
gctaaggaattagcgggtgaaattaaaagcaaaacgagcagcagagccgacttttaccat
ggcggtttggagtcaggggacaggattttaattcagcagcagtttattcataaccagctt
gatgtgatatgttgtacgaatgcgtttggaatgggtgtcgataaacctgatatcagatat
gtgattcattttcatctcccgcagacggcagaagcttttatgcaggaaatcggcagagcg
ggacgcgacggaaagccgagtgtcagcattttgctgcgggcgccaggggattttgaattg
caggaacaaattatccagatggagagtgtcacagctgaagaaatcgccgacgtaatccgt
gtgctagagaagacggaggagcgggatgagagaaggctgcgtgacgtattacttcagtat
ggcgtcggagagacacaggcccgtatgatgattcatctctttatgcagggaaaaacatca
gttgaactgatgaagaaagaaatttcatatcgcatggagctgaagctggaaaaaatgcac
cgtgtatcatttttgcttcagcgtgacggctgtttaaggcaggcactgttaacctacttt
gatgaatcatacgagcctgatgacggaaacctcccgtgctgttcacattgcggttttgat
ttatccttgtatgaacaaaaaggggaacggagtaaaatggcgccattagacagctggagt
tcggaattgcaccggatattcagcttgcagactgtaggtgagctgaactga
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