Bacillus subtilis PY79: U712_13595
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Entry
U712_13595 CDS
T02937
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bsp
Bacillus subtilis PY79
Pathway
bsp03410
Base excision repair
bsp03430
Mismatch repair
bsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U712_13595
03430 Mismatch repair
U712_13595
03440 Homologous recombination
U712_13595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsp03400
]
U712_13595
DNA repair and recombination proteins [BR:
bsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
U712_13595
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
U712_13595
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
U712_13595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
tRNA_anti-codon
PGM_PMM_II
Motif
Other DBs
NCBI-ProteinID:
AHA78657
LinkDB
All DBs
Position
complement(2641273..2643633)
Genome browser
AA seq
786 aa
AA seq
DB search
MLASKMRWEIQRPDQDKVKSLTEQLHITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
FEMKGMKEAADRIKQAISQQEKIMIYGDYDADGVTSTSVMLHTLQKLSAQVDFYIPDRFK
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAKVAKELGLDVIITDHHEPGPELPDVR
AIVHPKQPGCTYPFKELAGVGVAFKLAHALLGELPDELLDLAAIGTIADLVPLHDENRLI
ATLGLERLRRTNRLGLKELIKLSGGDIGEANEETVGFQLAPRLNAVGRIEQADPAVHLLM
SEDSFEAEELAAEIDQLNKERQKMVSKMTDEAIEMVEQQGLDQTAIVVAKAGWNPGVVGI
VASKLVDRFYRPAIVLGIDEEKGIAKGSARSIRGFNLFESLSECRDILPHFGGHPMAAGM
TLKAEDVPDLRSRLNEIADNTLTEEDFIPVQEVDLVCGVEDITVESIAEMNMLSPFGMLN
PKPHVLVENAVLEDVRKIGANKTHVKMTIRNESSQLDCVGFNKGELQEGIVPGSRISIVG
EMSINEWNNRKKPQLMIKDAAVSEWQLFDLRGKRTWEDTVSALPSAKRAIVSFKEDSTTL
LQTEDLRREVHVISSKDQAKAFDLDGAYIVLLDPPPSLDMLARLLEGKAPERIYFIFLNH
EDHFLSTFPARDHFKWYYAFLLKRGAFDVKKHGSELAKHKGWSVETINFMTKVFFDLGFV
KIENGVLSVVSGAKKRDLTDSQTYQAKQQLMELDQKLNYSSAEELKEWLNKLMKQDSEAY
ESTRRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgatgggaaatccagcgaccagatcaggataaggtcaaatca
ctcacagaacaattgcatataacacctcttgttgcgtccctgcttgtaaaaagaggcttt
gatacggcagaaagcgctaggctgtttttacatacaaaggatgccgatttttatgatcct
tttgaaatgaaaggcatgaaagaagcggcagatcgaataaaacaggcgatttcacaacaa
gaaaagattatgatatatggcgattatgacgccgatggggttacaagtacgtcagtgatg
cttcacacgctgcaaaaactgtcggctcaagttgatttttatatacctgaccgttttaaa
gaaggatatggacctaatgaacaggcgtttcgttcgattaaagaacggggcttctctttg
atcattacggttgatacaggaattgccgctgtgcatgaagcgaaggtggcaaaggaactc
ggactggatgtcatcattaccgatcatcatgaaccgggaccggagcttccggatgtccgt
gcgatcgtccacccgaagcagcctggctgcacttacccgtttaaagagcttgccggggtt
ggagtcgcgtttaagcttgcccacgctttattgggtgaacttcctgatgaactgcttgac
ctggcggctatcggcaccattgccgatctagtcccgctgcatgacgaaaacagattaata
gcaacactaggacttgaaaggcttcgacggacaaatcggctcggcttaaaagagctgatt
aagctgtcaggcggagacatcggagaagcgaacgaagaaacagtcggatttcagctcgca
ccaaggctgaatgccgtcggaagaatcgaacaggcggatcccgctgttcatttgcttatg
tcagaggattcgtttgaagcggaagagcttgccgcagaaattgaccagctgaacaaagag
cgccaaaaaatggtcagcaaaatgacggatgaagcgattgaaatggttgaacagcaaggg
ctcgatcaaactgcaattgtcgtggccaaagccggatggaacccgggagtcgtcgggatt
gtggcttcaaagcttgtggaccgtttctaccgaccggccattgttcttggtattgatgaa
gaaaagggaatcgctaaaggttcggcccgaagcatcagaggatttaatttatttgagagc
ctttctgaatgcagagatattcttcctcatttcggcggccatccaatggctgcggggatg
acgctgaaagccgaagatgtgccggatttgcgaagcaggctgaatgaaatagcggacaat
acgcttacggaagaggattttattcccgtacaggaagtcgaccttgtctgcggcgtcgaa
gacattacagttgaaagcatcgcagaaatgaacatgctgtctccttttggcatgctgaac
ccgaaaccgcacgttctcgtagaaaatgcagtactggaagatgtccgcaagataggggca
aataaaactcatgtcaaaatgacgatcagaaacgagtcgtcccagcttgattgcgtcggt
tttaataaaggcgagcttcaagaaggcatcgtaccgggttcaagaatttccattgtcggt
gagatgtcaatcaacgaatggaacaatcgaaaaaagccgcagcttatgataaaggatgcc
gctgtttctgaatggcagctgtttgatttaaggggaaaacggacgtgggaagacacagtt
tccgcccttccatctgctaaacgggccattgtctctttcaaagaagactcaacaacatta
cttcaaactgaagaccttcgccgagaagtgcacgtcatcagttctaaagatcaagcaaag
gcgtttgacctcgatggtgcatatattgtattactggatccgccgccttcgctggacatg
ctcgcacgtttgctggaaggaaaggcgcccgagcggatatattttatttttctcaatcat
gaggaccactttttatcaacttttcccgcaagagaccactttaaatggtattatgcgttc
ttgctgaaaagaggcgcttttgacgtgaaaaaacacggttcagagcttgcaaaacataaa
ggctggtccgttgaaacaatcaatttcatgacaaaggtgttttttgatctcggttttgtt
aaaatagagaatggtgtgctgtctgttgtgagcggagcaaagaaacgcgacttaacagac
tcacaaacatatcaggcgaaacagcagctgatggaactggatcaaaagctgaattattct
tctgctgaagagctgaaggaatggctgaataagctgatgaaacaagattcagaggcttat
gaaagtacgaggaggacataa
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