Betta splendens (Siamese fighting fish): 114841867
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Entry
114841867 CDS
T08231
Symbol
pkd2l1
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04990
polycystin 2L1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114841867 (pkd2l1)
04040 Ion channels [BR:
bspl04040
]
114841867 (pkd2l1)
Cilium and associated proteins [BR:
bspl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114841867 (pkd2l1)
Ion channels [BR:
bspl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114841867 (pkd2l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_7
MCM_C
Motif
Other DBs
NCBI-GeneID:
114841867
NCBI-ProteinID:
XP_028982895
UniProt:
A0A6P7KN41
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All DBs
Position
15:6350016..6355687
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AA seq
786 aa
AA seq
DB search
MNNRADSHLTAQVECEMDRLGNGAWVNQGYCGSPPPTRTVSTVYAPQTLYKGPTESMYKL
DTPAPFLHPSEGPQSTEKPLVRKQRSCCSFIKGLWGTTLTENTSDNRELFVRTTIRELVV
YLVFLVDMCLLTYGMTSSSTYYYTNAMTNLFVNTPSASGGSFQSIGAMADFWAFAQGPLL
DGLYWSTWYNNQSMNHGDQSFIYYENMLLGVPRIRQLKVKNNSCKIPNDFQEEIIGCYDV
YSEKKEDDLSFGLINGTAWTYHTEKAMNGSSYWGLLTTYSGAGYYQDLSRTKEESAAVLE
ELMSNLWLDQGTRAVFIDFSTYNANINMFCVLTLVVEFPATGGAIPSYQIRTVKLLRYVA
TWDYFILGCEMVFCLFILYYIVEEILELRIHKLAYFKSIWNILDIVIIMLAIVAIIFNIF
RTVKVDSLLGSLLRDPGIYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYISFNKTMTQL
SSTLGRCAKDILGFAIMFFIVFFAYAQLGYLLFGTVVQSFSTFAKCISTQFRIILGDFNY
DAIDSANRVLGPIYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELSSQKDDLHFTDIIKQ
SYMKTFVKLKLKKEKISDVQKALQSGSGEIEFKDFRETLKGMGHGDEEISAAFAQFDCDK
NQILDTNEQERMIQELEEKRNALSAEINDLGMNYEKELLEKPPVNSEQRNDPSQTNVDWE
QFLSLTRQFVHLENNMAGITLKIDLIMEKLGLQEKAHRKDMSDDGSVLVSMDKAPLQLDS
SFVSRM
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccgggccgacagccacctgacggcgcaggtggagtgcgagatggaccgactg
ggcaacggggcctgggtgaaccagggctactgtggctctccacccccgacccgaaccgtc
agcaccgtctacgcgccccagaccctttacaagggccccacagagagcatgtacaaactg
gacacccccgctccattcctccacccgtcagagggccctcagtccacggagaaacccctg
gtgaggaaacagagaagctgctgctcatttatcaaaggtctgtggggaacaacgctgact
gaaaacacctccgacaacagggagctgtttgtccgaacaaccatacgggagttagtggtc
tacctggttttcctggtggacatgtgcctcttgacgtacggtatgaccagctccagcacc
tactactacaccaacgccatgacaaacctgtttgtcaacacacccagtgccagcggaggt
agctttcagtccatcggtgcaatggccgacttctgggcctttgcccagggccccttactg
gacggcctctactggtctacctggtacaacaaccagtccatgaatcatggagaccagtct
ttcatctactatgagaacatgctgctgggagtccccagaatcaggcagctcaaggtcaag
aacaactcctgcaagatccccaacgacttccaggaggaaataataggatgttacgacgtg
tacagcgagaagaaggaggacgaccttagctttgggctcatcaatggcacagcctggacc
taccacactgagaaagcaatgaatggttcctcctactggggcctgctcaccacctacagc
ggagcgggatactaccaagacctgagtcgaaccaaagaggagagcgcggctgtgctggag
gagctgatgagcaacctttggctggaccaaggaacccgggctgtcttcatagacttctcc
acatacaacgcaaacatcaacatgttctgcgttctcacgttggtagttgaattcccagcg
accggtggagcgatcccgtcctaccagatccgaacagtcaaactgcttcgctacgtggcc
acctgggattacttcatcctggggtgtgagatggtcttctgtttattcatcctttactat
attgtggaggagattctggaacttcgcatacataagcttgcctacttcaaaagtatctgg
aacatactggatattgtgataataatgcttgccatcgtcgccatcatattcaacattttc
cgaacggtcaaagttgacagtctgcttggcagtctgctgcgtgaccctggcatctatgcc
gactttgaatttctggccttctggcaaacacagtacaacaacatgaatgcggtgaaccta
ttctttgcgtggatcaagatcttcaagtacatcagtttcaataagaccatgactcagctg
tcttctacactgggacgatgtgctaaagatattttgggatttgcgatcatgttcttcatc
gtcttctttgcctacgcccagcttggatatttgctctttgggacagtggttcaatccttc
agtacctttgcaaaatgcatttccacacagttcaggattatccttggagactttaattat
gatgccattgacagcgctaacagagttctggggccaatctactttgtgacctatgtgttc
tttgtcttctttgtcctgctgaacatgtttctggccatcataaatgacacatattctgaa
gtaaaggaggagctctcatctcagaaggatgatctgcatttcactgacattatcaaacag
agctatatgaagacatttgtgaaactgaaacttaaaaaggagaaaatatcggatgttcag
aaggcactgcagtctggatctggagaaattgaattcaaggacttcagggaaactctgaaa
gggatgggacatggtgatgaggaaatttctgcagccttcgcacagtttgactgcgacaag
aaccaaattttagacacgaacgaacaggagaggatgatacaagagctggaggagaagagg
aatgccctgagtgctgaaatcaatgatcttggaatgaattatgagaaagaattactggag
aagcctcccgttaactctgagcagaggaacgaccccagccaaaccaatgtggactgggaa
cagtttctaagcctgacaagacagtttgtgcatcttgaaaacaatatggctggaatcaca
ctgaaaattgacctgatcatggagaaactaggattacaagagaaagctcataggaaggac
atgagtgatgatgggagtgtcctggtttccatggacaaagcgccacttcaactggattct
tcatttgtgtctcgtatgtaa
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