Betta splendens (Siamese fighting fish): 114841914
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Entry
114841914 CDS
T08231
Symbol
ccdc88ab
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114841914 (ccdc88ab)
Cilium and associated proteins [BR:
bspl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114841914 (ccdc88ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
KASH_CCD
DUF4472
Motif
Other DBs
NCBI-GeneID:
114841914
NCBI-ProteinID:
XP_028982991
UniProt:
A0A6P7KK07
LinkDB
All DBs
Position
15:15711871..15752416
Genome browser
AA seq
2044 aa
AA seq
DB search
MESEVFTPLLEQFMLTPLVCWVKTVGHPTVTDGSKLSEYIELVDGIYLNEIMLEINPKST
VQRTNKKVNNDPTLRIQNLSILIRQIKAYYQESLQQLVMMPLPNVLILGRNPLSEQGLEE
MKKLLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLESGE
IPPEDLDSLSRNLAFHLKCLVDERDTQLETIVELTQERDCVQLSPLAPCPTQSPGDSPSM
RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENMEVELKRLQQESYQLLS
DARLARAYRDELDSLREKAIRVDKLESELSRYKERVHDIEFYKARVEELKEDNQILMETK
TMLEEQLDASRTRSDKLHLLEKENLQLKSKIHDLEMERDLDRKRMEELLEENLVLEMAQK
QSVNESLHLGWELEQLSKTPELTEAPQKSLGDEVNELTSSRLLKLEKDNQTLLKTVEELR
GASSQDTLAKMSKLSQENQRLTQKLEQLESEVTADRESLRTAESLSTDLMKEKALLEKTL
ETLRENSERQLKGLEQENKHLGQTVSSLRQRCQVGAEARVKDVEKENRILHESICETTAK
LNKMEFERKQLRKELEVTKEKGERAEELEVHLHKLQRENESLQKKVASLGITCEKVISLE
KENTELEAEGRRLKKKLDTLKNMAFQLEALEKENAQLEQENLELRRSAESLRSAGVKAVQ
LEAENRELESEKSQLKRNLELLKASSKKTERLEVSYQGLDTENQRLQKALENSSKKIQQL
EAELQEVETENQTLQRNLEELKISSKRLEQLEQENKSLEQESSQLEKDKKLLEKENKRLR
QQAEIRDSKLDDGNQRIAALEKENRTMGKEMIFFRDSCTRVKDLERENKELVKLATIDKK
TLITLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLHDEGSDDRFKLLETKLEST
LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPRG
GGDPQSASKWEKESHEATRELLKVKDRLIEVERNNATLQAEKAALRSQLKQLETQSSNLQ
AQIVAVQRQTASLQENNTTLQTQNAKLQVENSTLSSQSAALMAQNAQLQTQQSSVEGERE
GALKDKEELRATYEMLLRDHEKLAALHERQASEYEALIVKHGSLKSSHKNLEQQHRDLED
RYKHLMQRKEDLEELEKSLKEQQDKMAFENQAHQTTADQYKLLKEENDRLNTTYRQLLKD
NENLQLDHKNIKSQLNSAKLEQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMKKLMKPNKSRERMRSLTLTPSRSEIGDGFLAFPQDSQDSS
SIGSGSNSLDDTLTHKKRRRGQQPHAQGQSSSNALKLPFMRNRSKDKDKTKAIYRRSMSM
NDLLQTMAVAGGPGGQWVCSSENLDGPEAGDGAITGSSRRSGQRMKELALSTNAIDCATL
TLPAAGPVRTRPRLQVKADNASCEDVVGSLDDPKSQDLQVHGSALALWPFPVVCRVPCSI
CTSRPSSLHSNRTTSSNSNNNSHLTSPLEAKGTLNGSLSRPHSESSGEFSLSLDQEVWSS
SGSSPIQQPASSRSSHQSPLQLRKSLDPSTASTGTPDQTQIRKTASPGNEVLSLQQFLDE
GIDPAESGSQENLTVDSPRLSTSSERALKERAPTKGRGILRSSSGKAAPVSSERPPRSSG
QPGRPTLRKAESTRVRGSASLRSSLSSQGKATSVSERLDSASSTLPRASSVISTAEGTTR
RTSIHDLLSKDNRQPVSVDSSPPVAPTKAGVHSQPTTSEYNLKGPLTSTTPLPKSLSLPC
PSMEDPDLSTLESFLGPSFTVESVFMDSIFSESAGKNLPFLSINPTLVSNISGPPATNKT
HPPLNPGHSSTRSQTSHSQSNGQVRTGPDSQEYKEGVDPSQMSDLDPSLSPEDNQSLWFE
YGCV
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaggtttttacccctttactggagcagttcatgctgacgcctctggtctgc
tgggtgaagaccgtggggcacccgacggtgacagacggctccaaattatcggaatatatt
gaattagtggatgggatttatctgaacgagatcatgcttgagataaatcccaagtccacg
gtgcagaggaccaacaagaaagtgaacaatgacccaacactgcgtattcagaacctttct
attctcatcaggcaaattaaggcttactatcaggagagtctccagcagctagtgatgatg
cctctgcccaatgtgctgatcctgggccgtaaccctctctcagagcaaggtctggaggaa
atgaagaagctgctgctgctgctattgggctgtgctgttcagtgtgaaaagaaggaagag
tacattgagcgtatacagactctggattttgacaccaaagctgccatagcatcccacatc
caagaggtgacacacaaccaggagaatgtagttgacctgcagtggttagaaagtggggaa
atacctcctgaggatctggacagcctctccagaaacctggctttccatctcaaatgcctt
gtggatgaaagggacacacaactggagacgatagtggagctaacccaggagagagactgc
gtgcagctgtctccactggctccatgtccaacccagtctcctggtgactctcccagcatg
agaaggactgaaagccgccagcacctctctgtggagctggctgatgccaaggccaagatc
agacgcctgcgacaggaactggaggagaagagtgagcagctcttggacaccagacaggag
cttgagaacatggaggtagagctcaaaaggcttcagcaagagagctaccagctgctgtcg
gacgctcggttggctcgggcctaccgcgacgaactggattcgctgagggagaaagcaatt
cgtgtggacaaactggagagtgagctcagcagatacaaggagagagtgcacgacattgag
ttttacaaggccagagttgaggagctgaaggaggataaccagatcttgatggagactaag
acaatgctagaggagcagctggatgctagcaggacccggtctgacaaactgcatctactg
gagaaggagaatctgcagcttaaatccaagatccatgatctggagatggagcgtgacttg
gatcgtaaacgcatggaggagcttttggaggagaatcttgtgctggaaatggcccagaaa
cagagtgtaaatgagtccctgcacctagggtgggagctcgagcagctgtccaaaacaccc
gagttgactgaagccccacagaagtctctgggtgatgaggtaaatgagctgacctccagt
cgcttgttgaagctggagaaagacaatcagacactgctaaagactgtggaggagttaaga
ggagcatccagccaggacactctggcaaaaatgtccaaattgagccaagaaaaccagaga
ctgacccaaaaattggagcagttggagagtgaggtgactgcagacagagagtcacttcgc
actgcagagtccctcagcactgacctaatgaaggagaaggctttactggagaaaaccctt
gaaacgctcagagaaaattctgagagacagctgaagggtctggagcaggagaacaagcac
ctgggacagaccgtgtcgtctttgcgccagcgttgccaggtgggtgctgaggcccgggtc
aaggatgtggagaaagagaatcgcattcttcacgaatccatttgcgagacaactgccaaa
ctcaacaagatggagtttgaaagaaaacaattacgtaaagagcttgaggtgacgaaggaa
aaaggtgagagggcagaggagctggaagttcacttgcataaactacagagggagaacgag
agccttcagaagaaagttgccagtctcggaatcacctgtgaaaaggtaatctctttggag
aaggagaacacagagctggaagcagagggccgccgtctaaagaagaagctggatactctg
aagaacatggcatttcagctggaggctctggaaaaggagaacgctcagctggagcaggag
aacctggaacttcgtcgttcggctgagagcctgcggtcagcaggggtgaaggctgttcag
ctggaagctgaaaaccgggagcttgagagtgagaagagtcagctgaagcgcaacctggag
ctgctcaaggcctcctccaaaaagacagagagattagaggtgagttaccagggcctagat
actgaaaaccagcgcttgcagaaggctttagagaacagcagcaagaagatccagcagttg
gaggcagagctgcaggaggtggagactgagaatcaaaccctgcagcgcaacctggaggag
ctcaaaatttccagtaaacgcctggaacagctggagcaagagaacaagagtctggagcag
gaaagctcccagctggagaaagacaagaagcttctggaaaaggagaacaagcggctgagg
cagcaggctgagattcgtgactccaagctagatgacggcaaccagcgcatcgctgcactg
gagaaagagaatcggacgatgggcaaagagatgatcttctttagggattcctgcacgaga
gtcaaagacctggagagggagaacaaagagttggttaaactggcgactattgataagaag
accctaatcacactcagagaggagcttgtgagtgagaagctgcgcactcagcagatgaat
aatgatttagaaaaactaacccacgagttggagaagattggactcaacaaagaaaggctg
ctgcatgacgagggctcggacgacaggtttaaactcctggaaaccaaactggaatcaact
ctgaaatcatctttggagattaaagaggaaaagatcgctgccctagaagccagactgcaa
gagtcctcaaacctgaaccagcaacttcgccaggagctcaagaccgtgaaaaaaaattat
gaagcgctgcgccagagggaggaagaggagagaatggtgcagagctctccccctcgtgga
gggggggaccctcagtctgccagtaaatgggagaaggagagccacgaagccaccagggaa
ctcctgaaagtcaaagacagactcattgaggtggaaaggaataatgccacattacaggcc
gagaaggcggctctgagaagccagctgaaacaactggagactcaaagctccaacctgcaa
gcccagatagtggccgtgcagcgacagactgcctccttacaggagaacaatacaacgcta
cagacacagaacgccaagctgcaggtcgagaactctaccctgagctcgcagagtgcagct
cttatggctcagaatgcccagctacagacccagcagagcagcgtggagggtgagcgtgag
ggagcactaaaagacaaagaggagctgagggccacctatgagatgctcctccgcgatcac
gagaaactggcagcactccacgagaggcaggcgtccgagtacgaagctctaatcgtgaag
cacggcagcctgaaaagctcccacaagaacctagagcagcaacacagggacttggaggac
aggtacaagcacctcatgcagaggaaggaagacctggaggagctagaaaaaagcctgaaa
gagcagcaggacaagatggcatttgagaatcaagcacaccaaaccacagctgatcagtac
aaactgcttaaggaggaaaatgacagattgaatactacctatcgccagctgctgaaagac
aatgagaatctccagctggaccataagaacataaagagccaattaaacagcgccaagttg
gagcagaccaagctggaggcagagttctcaaaactgaaggagcagtaccagcagctggac
atcacctccaccaagctcactaaccagtgtgagctgttgagccagttgaaaggaaacctg
gaggaggagaatcgccacctgttggatcagattcagactttgatgctacagaatcgcaca
ctactggagcagactatggagagcaaagatctgttccacgtagagcaaagacaatacata
gacaaattgaatgagctcaggagacagaaggagaaacttgaggaaaagatcatggatcag
tacaagttttatgacccctcacccccccgcagacgtgggaactggattactctgaagatg
aagaagttgatgaagccaaacaagagtcgggagaggatgcgttccctcacgctgactccg
tcccgttctgagattggggacggttttcttgcttttccacaggacagccaggacagctcc
tctattggctctggctccaactcgctggatgacacactcacacataagaagcggaggaga
gggcagcagccccatgcacaggggcagagttcctccaatgctttaaagttgcctttcatg
aggaacagatccaaggacaaagacaagaccaaggccatctaccggcgatccatgtctatg
aatgacctgctgcagaccatggcagtggccgggggtccaggggggcagtgggtttgcagc
agtgagaaccttgacggtcctgaagctggagacggtgccattaccggcagcagcaggcgc
agcggacagcgcatgaaagaactggccctttccaccaacgccatcgactgcgccaccctc
accctgcccgccgcagggcccgtcaggactaggccccggcttcaggtcaaagcagataac
gcgtcctgtgaggatgttgtcggctctcttgatgaccccaagagtcaagacctgcaggtt
catggcagtgctctggctttgtggccgttccctgttgtgtgcagagtgccctgtagcatc
tgtacctccagaccttccagtctccatagcaacaggactaccagtagtaatagtaacaat
aactcccacctcacttctcctctggaggccaaaggcacgctgaacggcagcctcagcagg
cctcacagcgaaagcagcggcgagttcagcctgagtttagaccaagaggtgtggtccagc
agcggcagcagccccatccagcagcccgcctcctcacgctcctcccaccaaagcccccta
cagctgcgcaagtccctggacccatccaccgccagcacagggacccccgaccagacccag
atcaggaagacggcatcaccaggcaacgaggtgctctccctgcagcagttcctggatgag
ggtattgatcctgcagagtctggcagtcaagagaacctcaccgtggactcccctcgatta
tccacctcgtctgagcgcgcgttgaaagaacgcgctcccacgaagggccggggcattttg
cgctcgtccagtggtaaagcagcgccggtcagctccgagcgccccccgaggtcctcagga
cagccggggcgccccaccctgcggaaggcggagagtactcgggtcagaggctctgcctcg
ctccgctccagcctgtcctcccagggcaaagccacgtcagtgtccgaacgcctggactcc
gcttcgtccacgctcccccgcgccagcagcgtcatctccacagctgaaggcaccacgcgg
cggaccagcatccacgacctgctgtctaaggacaaccggcagcccgtgtcagttgactct
tctcctcctgttgctcccaccaaggctggagtccactcccagcctacaaccagtgagtac
aacctgaagggacccctcaccagcaccacccctctgcccaagtcactcagcctaccttgc
cctagcatggaggaccctgatctctccaccctcgagtctttcctgggcccgtcctttact
gtagagtcggtgttcatggactccatctttagtgagtctgcaggcaaaaacctccccttc
ctttccataaaccccaccctagtcagcaacataagtgggccgcctgctacaaataaaaca
cacccacctcttaaccccggtcacagttccacccggagccagacctcgcatagccagtcg
aacggccaggtgagaaccggcccagacagtcaagagtacaaggagggtgtggatcccagt
caaatgagtgatctggatccatcactgagcccagaggacaaccagtctctgtggtttgag
tacggctgtgtgtga
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integrated database retrieval system