Betta splendens (Siamese fighting fish): 114842024
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Entry
114842024 CDS
T08231
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114842024 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114842024 (polr1b)
Enzymes [BR:
bspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114842024 (polr1b)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114842024 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
114842024
NCBI-ProteinID:
XP_028983272
UniProt:
A0A6P7KL21
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All DBs
Position
15:complement(6312869..6318412)
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AA seq
1134 aa
AA seq
DB search
MDSLGKWSSLPQGPSLKNLTEGGFGALKETQHAAVQDLTKAHIESFDQAVTDGLSRVVQA
IPPLEFTVKNETISLSFVEATIYHPMVAKGSICSETRVFPAECRGRRSSYKGKLVADVSW
SIDGVPKGIIKQSLGQVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKNRGQGYTQYGISMRCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDYQIYQELIKGREDNSLYKTCTSEMLRVVMEQGCNTRHQV
LNYLGERFRVKMNLPEWYTNEQCANFLLDECVCIHLKSGVEKFYLLCLMTRKLFSFAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKERLSAWLQSVKLSFDKRGSRLSGGWTAENVMKIF
NMGTDVTKPFEYLLATGNLSSKTGLGMLQSSGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAQTLLTTSLPALLCSLGVT
SVDGSPGQPFSDCYPVLLDGAVVGWVESELAPVVVNSLRRFKVLREKKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVQNLALGKQELIGTFEQLYINVGILEAEIDPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLQTPQSA
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELID
LADKVKGQDSVVFGTKPGDPKASDKLDADGLPYIGSTLQYGDPFYSYINLNTGQTFTNYY
KSQEACVVDNIKICSNESGSGRFKRVCITIRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLSHDATPFTFSEENSALEY
FGEMLRAGGYNYYGTERMYSGLSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGASFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSAMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDIK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggactctttaggaaagtggagcagtttaccccaaggtcccagtttaaagaacctgaca
gagggaggctttggagccctgaaggaaacgcaacatgctgctgttcaggatttaacaaaa
gctcacatcgagtcttttgaccaggctgttactgacggactcagccgcgttgtgcaggcc
atcccgcccctggagtttactgtcaaaaacgagacgatcagcctttcgtttgtggaagcg
accatctaccacccaatggtcgccaaaggaagcatctgcagcgaaacgagggtgtttcca
gctgaatgccggggaagaagaagctcatacaaagggaagttggtggcagatgttagttgg
tccatcgatggggttcctaaaggcataatcaagcagtccctgggccaggtaccaatcatg
gtgaagtccaagctgtgtaatctgcatggcatgtctcctaaagagctcgtagagcaccac
gaagaagcagaggaaatgggaggctatttcattgtgaatggaatcgagaaggttatccga
atgctgatcatgccaaggaggaactatcccattgccatgtccaggcctaagtggaagaac
aggggccagggctacacacagtatggcatttcgatgcgctgcgtgaaggaagagcacacg
gccataaacatgaacttacattatctggaaaatgggacggtgatgctgaactttatctac
cagaaagagcttttcttcctcccactaggctttgcactcaaggccctggtggactttaca
gactaccagatctaccaggagctgatcaaggggcgtgaggataattctctctacaagacc
tgcacctcagagatgcttcgcgtcgtcatggagcaaggctgcaacacccgtcaccaggtg
ctcaattacctcggagagcgcttcagggtcaaaatgaaccttcctgagtggtacacgaac
gagcagtgcgccaacttcctgctagacgagtgtgtctgcatccacttgaagtcgggcgta
gagaagttttacctgctgtgtctgatgacgaggaagcttttctcgttcgccaagcaggag
tgcatggaggagaatcccgacagcatcatgtgtcaggaagtgctcacccctggtcagctg
tacctcatgtttcttaaggagagactgtcagcctggttgcagtctgtgaagctttccttt
gacaagagaggcagcagactgagtggaggatggactgctgaaaacgtgatgaagatattc
aatatgggcactgatgtgaccaaaccatttgaatatctgttggccactggtaacctcagt
tctaaaaccggtctcggcatgttgcagagctcaggtctgtgtgtcgtagctgacaaactc
aacttcatccgttacctgtcccatttccgctgcgtgcacagaggagcagcgttcgccaag
atgaggaccacctcagtccgcaagctgctgcccgagtcctggggcttcctgtgtcccgtc
cacacccctgacggagagccctgcggcctcatgaaccacatgacggccagctgtgaaatt
gtggctcagaccttgctgaccacatctctcccagctctgctctgttccttaggcgttact
tcagtggatggttcacctggtcagccgttctcagactgctaccctgtgctgctagatgga
gctgttgtagggtgggtggagagtgaattagcaccagttgtggtcaattcccttcgcaga
tttaaggttctgagagaaaagaaaatccctccctggactgagattgttctggttcctaaa
acgggcaaggccagtctgtatccaggcctttttctcttcacaaccccctgtcgcatggtg
cggcctgtacaaaacctggctctcggaaagcaagagttaatcggcacctttgaacaactt
tacatcaacgtgggcatcttggaggctgagattgatccaggagtgaccacacaccaggag
ctcttccctcacagcatgctcagcgtggtggctaacttcatcccgtactcggaccacaac
cagagtcccaggaacatgtaccagtgtcagatggggaagcagacgatgggtttccccctg
cactcattcacggatcgctccgacaacaagctgtaccggctccagaccccacagagcgcg
ctggtcaggccctacatgtacgaccactacaacctggacaactaccccagtggcaccaac
gccattgtggccgtcatatcttacacaggctacgacatggaggatgctatgattgtgaac
aagtcgtcgtgggagagaggcttcgcccatggaagtatctacaagactgagctgatcgac
ctggcagacaaagtgaagggacaggacagcgtggtgtttgggactaaaccaggcgaccct
aaggcgagtgacaaactggacgctgatggacttccttacataggatcaacacttcaatat
ggagaccctttctacagctacattaacctcaacactggccagaccttcaccaattactac
aagagccaagaagcctgcgttgtggacaacatcaagatctgcagcaatgaaagtggctcc
ggccgctttaaacgcgtctgcatcactatacgagtgccacgaaaccccaccatcggtgac
aagttcgccagccgccacggtcagaagggcatcctgagccgcctgtggccggcggaggac
atgcccttcacggagagcggcatggcccccgacatcctgttcaacccccacggcttcccg
tcgcgtatgaccatcgggatgctgatcgagagcatggccggcaagtcggccgccctccac
ggcctgagccacgacgccacgcccttcacgttttctgaggagaactctgcgctggagtat
tttggcgagatgctacgcgccggtggctacaactactacggcacggagcgaatgtacagc
ggactaagcggtctggagctggaggctgacatcttcatcggcgtcgtgtactaccagcgc
ctacgtcacatggtgtccgacaagttccaggtgaggaccacgggagcgcgggacaaggtg
accaaccagccggtgggagggaggaacatccagggagggatccgtttcggggagatggag
cgcgacgccctcttggctcacggcgcttccttcttgctacacgatcgcctcttcaactgc
tcagaccgatcggtggctcaggtgtgtgtggactgtggcagtctgctctccccactttta
gagaagccacccccctactggtcagccatgcgccaccggaagactgtctgcaccctgtgt
ggcaaaagtgactctattgactctgtctcggttccatacgtcttccgctactttgtagct
gagcttgcagcaatgaacattaaagtcaaactggacatcaaatga
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