Betta splendens (Siamese fighting fish): 114842442
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Entry
114842442 CDS
T08231
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bspl00535
]
114842442 (col14a1a)
Proteoglycans [BR:
bspl00535
]
Extracellular matrix (ECM) proteoglycans
Others
114842442 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
VWA_3
DUF4959
Mid1
Motif
Other DBs
NCBI-GeneID:
114842442
NCBI-ProteinID:
XP_028983774
UniProt:
A0A6P7KQK5
LinkDB
All DBs
Position
16:15910611..15995761
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AA seq
1782 aa
AA seq
DB search
MFSAALIRWCLWVPLVLLALVSICPIKAQDQVPAPRRLRFKVLSSNNLLVAWKESKGDVD
SYLFVYNTLPGGRPREVAVPRSNPRVLITDYNRVKDYVVSVFAVRGSEHSRPLQGRYKAE
LRDSDAGDRTEPQTLTESTAPPDDANEISGVDQFICHTEAIADIVILVDGSWSIGRINFR
LVRMFLENLVNAFDVGINKTRIGLAQYSGDPRIEWHLNAFTTKDTVLDAVKNLPYKGGNT
LTGLALTYILENCFKPESGSRAGVPKIGILITDGKSQDDVIPPAESLRDAGVELFAIGVK
NADENELRAIASEPQDTHVYNVADFNIMSSIVEGLTKTVCEQVEQQDKDIKEKQAPEEVG
PPLDLWTSEVTARSFRVSWTHAPGNVEKYRVVYYPADGGPPQEAVVDGSEASVALKHLSS
MTEYQLAVFAVYTDEASEALRGSATTLALPAVTGLQLFDVTHNTMKARWDRVDGASGYML
LYAPLTGDGVLDEKEVKLSDVVTELELDGLTPRTEYTVTVYATYGEESSDPVTRQETTLP
PSPPSNLQLSDITHNSAHISWDPAPPGVKGYRVVWVRTDGLVSSEVEVGPVSSYDLSQLS
SLTEYSVAVVALYNRGESDPLADGFTTTPVPGPLNLHASDVGTDGFGVGWDHSAGDIVLY
RLSWATVTGGDTKEVILSGSDDRYVLTGLSPSTEYEVMLTAIFKDESESDTVSVTETTLT
RTTTIATTTKAARQAVRNLRLSDETTQSLEASWELHDPHVEGYRVSYAALRGDRREQSVL
VPAGQRRAVLQPLLSDAQYKVTVTPVYVDGGDGISASALGATLPLSPPGNLRVSEEWYSR
FRLTWDPPQAPTEGFRIVYQPTNVPGPVLETSVGEDANSVLLLNLLSGTEYSVEVTASYP
AGQSQPLHVNAKTLFLGVSGLSTYQLRHNSMCVQWQPLPHATLYRASIQSTLNGQRQEVN
LGGAASRNCFYDLFPSSQYQISVHTQMQELEGPSVSITDMTLPAPTPAPTDPPTTEPPPT
IPPAKEVCKEAKADLAFLVDGSWSIGDDNFMKITGFLYSTMGSLDLIGPDGTQVAIAQFS
DDARTEFQLSSHSNKEALLEAIQRIRYKGGNTKTGRAIKHVKESIFTPEGGARRGIPKVL
VVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAV
KKIEEQLITFVCEAATATCPSVLMSGNTIAGFRMMEMFGLVEKEYSTMAGVSLEPGSFNS
FPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPPEPFALWEILNKANKPLVG
LILDNSKKNLKFFNYDYRGDFQTVTFEGPQIKKIFHGSFHKLHVTISKTSVKVVLDCSAV
GERAVSAAGNITTDGLEVLGRLVPSRGPRSSSAPFQLQMFDIICSTSWASRDKCCELPSL
RVEEQCPPMPHSCTCTQDSKGPPGPSGPPGGPGIRGARGDRGEPGVTGPQGPVGEIGPPG
LPGPPGPQGPSGLSIQGPPGAAGQKGDRGEMGPAGLMGVPGSSGSPGRDGPPGARGLPGN
NGPQGRQGPPGPIGVPGAPGAPGPGGPTGSQGDQGLPGPAGSKGDKGERGDVQSQAAVRA
IARQVCEQLIQSHLSRYSSILNQIPVQSAASVRTVPGPPGEPGRRGSPGPQGEQGPPGRP
GFPGTNGQNGRPGERGLPGDKGERGSPGVGSQGPRGPPGPPGLPGEGRTGSQGPPGRPGS
PGQVGRPGSPGTTGPAGPPGYCDQNSCLGYNVGVQQDYGNEY
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagcagcgctgatcaggtggtgtttgtgggttccactggttttactggcactg
gtttccatttgccccattaaggcccaggaccaagttcccgctccacggaggctgcgcttc
aaagtgctgagctccaacaacctccttgttgcgtggaaggagtccaaaggagacgtggac
agttacttgttcgtgtacaacactttaccaggcggtcggccgagggaggtcgccgtcccc
aggtcaaaccccagagtgctgataacggactacaaccgcgtgaaggactacgtcgtcagc
gtcttcgctgtccggggcagcgaacacagcagaccccttcagggccgatataaagctgaa
ttaagagacagcgatgcaggagacaggactgagccccagacgctgacggagtcgactgcg
cctccagacgatgccaacgagatctcaggagttgaccagttcatctgccacaccgaggcc
attgcagacattgtgatcctggtggacggctcgtggagcatcggtcgcatcaacttccgg
ctggtccgcatgtttctggaaaacctggtcaacgcctttgatgtgggcatcaataagaca
aggatcggtctggctcagtacagcggcgatcccaggatagagtggcacctgaatgctttc
accaccaaagacacggtcctggatgcagtgaagaacctgccctacaaaggaggaaacacc
ctcacaggcctcgcgctcacttatatcttggagaactgcttcaagccggaatctggctcg
agggccggcgttcccaagatcgggatcctcatcacggacgggaagtcgcaggatgacgtc
attccgccggcggagagcctgcgcgacgccggcgtggagctgtttgccatcggtgtcaag
aacgcggacgagaacgagctgcgcgccatcgcgtcggagccgcaggacacgcacgtctac
aacgtggccgacttcaacatcatgagctccatagtggagggactcaccaagacggtgtgt
gagcaagtggagcaacaggataaagacattaaggaaaaacaggctccagaggaggtggga
ccgcctctcgacttgtggacgtccgaggtgacggcccgcagcttccgggtctcgtggact
cacgcccctggaaacgtggagaagtacagagtggtgtactaccctgctgacggggggccg
ccacaggaggccgtggtggacggcagcgaagcctcggtggcgttgaagcacctcagctcc
atgactgagtaccagctggctgtgtttgccgtgtacacagacgaggcgagcgaagctctg
agaggatcagcaacaacattggctctgcccgcagtgactggcctccagctcttcgatgtg
actcacaacaccatgaaagcaaggtgggaccgcgtggacggcgcctctggttatatgctg
ctctatgcaccgctcaccggcgacggagtcctggatgagaaggaggttaagctgtcggat
gtggtgacggagctggagctggacgggctgacgccccgcactgaatacaccgtcaccgtc
tacgccacgtacggagaggagtccagtgacccggtgacgcggcaggaaaccactctgccc
ccgagtcctcccagcaacctccagctctccgacatcacccacaactcggcccacatcagc
tgggaccccgcgcctccaggagtgaagggctaccgcgtcgtgtgggtcaggaccgacgga
ctagtcagcagcgaggtggaggtgggtccggtgagctcctacgacctgagccagctgtcc
tcgctgacggagtactctgtggccgtcgttgccctgtacaaccggggcgagtccgatccg
ctcgccgatggattcaccaccactcccgttcccgggcccctgaacctgcacgccagtgac
gtcggcaccgacggcttcggggtcggctgggaccactcggccggcgacatcgtcctctac
agactctcctgggcgacggtcacgggcggcgacacgaaggaggtgatcttgagtggaagt
gatgaccgatacgtcctgactggtctgagcccatccactgagtatgaagtgatgctgaca
gcgatatttaaagatgaatctgagagtgacaccgtctctgttacggagaccacgttgacc
aggacaacaacgattgctaccacaaccaaagcggcccgacaggctgtgaggaaccttcgg
ctgagcgacgagaccacccagagcctggaggcgtcgtgggagctgcacgacccccacgtg
gagggctaccgggtgtcctacgccgctctcaggggagaccgccgagaacagtctgtgttg
gttcctgccggtcagaggagagcagtgctgcagccgttgctttcagacgctcagtacaaa
gtgactgtgacgccggtgtacgtggacggcggagatggcatcagcgcgtctgccctggga
gcgacactgcccctctcgcctcctggaaacctgcgcgtgtcagaggagtggtacagccgc
ttcaggctcacctgggaccccccccaggcccccacagagggcttcaggatcgtctaccag
cccactaacgttccaggaccggttctggagacatcagtgggagaagacgccaactccgtt
ctcctcctgaatctgctgagtgggactgagtacagcgtcgaggtgacagcttcctaccca
gcaggacaaagtcagccgctgcacgtgaacgccaagacgttgttcctcggcgtctccggc
ctgtccacctaccagctgcgtcacaacagcatgtgcgtccagtggcagccgctgccgcac
gcgacgctgtacagggcgtccatccagtccacgctcaatggtcagaggcaggaagtgaac
ctgggaggcgccgcttcccgaaactgcttctacgacctcttccccagcagccagtaccag
atcagcgttcacacgcagatgcaggaactggagggaccctcggtctccatcaccgacatg
acgctgccagcacccactccggctccgaccgacccgcccaccacagagccccctcccacc
atcccgcctgctaaagaagtgtgtaaagaggccaaggctgacctggcgttcctggtcgat
ggctcctggtccatcggcgacgacaacttcatgaagatcacgggtttcctctacagcacc
atgggctcgctggatctgatcggacccgacggcacccaggtggccattgctcagttcagc
gacgacgctcggaccgaattccagctgagttcccatagcaacaaggaggcgctgctggaa
gctattcagaggatcagatacaagggagggaacaccaagacaggccgggccattaaacac
gtgaaagaatccatcttcaccccagagggtggggccaggaggggcattcccaaggtcctg
gttgttctgaccgacggacgttcccaagatgacgtcaacaaggtgtccaaggagatgcag
atggaaggctacatcatcttcgccatcggcttcgcggatgccgactacggagagctggtg
aacatcgccagcaagcccagcgacagacacgtgttcttcgtggacgacctggacgcagtg
aagaagatcgaggagcagctgatcacgtttgtctgcgaggccgctactgccacttgtccg
tctgttttgatgagcggtaacacgatagcaggtttccgtatgatggagatgttcggcctg
gtggagaaggagtacagcaccatggctggagtgtctctggagccgggctccttcaacagc
ttcccgtgctacaggttacaccgcgacgccctggtgtcccagcccacaaagtatcttcat
cctgaagggttgccctctgactacaccatttctatgatgctccgccttctcccggagacc
ccgccagagccctttgcattgtgggaaatccttaacaaagccaacaagcccttggtggga
ctcatcctggacaactctaaaaaaaacctgaaattcttcaactacgactacagaggagac
ttccagaccgtcacctttgaaggaccccaaataaaaaaaatctttcacggcagcttccac
aagctccatgtcaccatcagtaagacgtcagtgaaggtggtgctggactgttctgcggtg
ggagagagagccgtcagtgcggccggaaacatcaccacggacgggctggaggtcctgggg
aggctcgttccgtccagaggcccgagaagcagctccgcccccttccagctccagatgttt
gacatcatctgcagcacatcctgggccagcagagataagtgctgtgagctgccatccttg
cgagttgaggagcagtgtccccccatgcctcactcctgcacctgcacccaggacagcaaa
ggacctccaggtccgtccggacccccgggtggtccaggcataagaggagcccgaggagac
agaggagagccaggcgtgacgggacctcaaggacctgtaggagagatcggccctcctgga
ctcccaggaccacctggtcctcagggacccagtggactctccattcagggacccccgggt
gccgctggacagaagggcgacagaggagaaatgggcccggctggactgatgggcgtccct
ggcagctctggctcacctggcagggatggtcccccaggagcaaggggtctgccaggtaat
aacggaccacagggacgacaaggaccccctggacctattggagtcccaggagcacctgga
gctccaggaccaggtgggccgacagggtcccagggggatcaaggacttcctggtcctgct
ggttctaaaggagacaagggagaacggggggacgttcagtcccaggctgctgtgcgtgca
atagcacggcaagtgtgtgagcagctcatccagagccacttgtctcgctatagctccata
ctgaaccagatccccgtccagtctgcggcatctgttcgaacagttcccggaccacccgga
gagcctggcaggagaggctcccctggcccccagggagagcagggtccacctggcagacca
ggcttcccaggtaccaacgggcagaacggacgcccaggagaaagaggtctgccaggagac
aagggggagagggggagcccaggggttggaagccagggcccccgaggaccacccggacct
ccagggctgccaggcgagggacggacaggcagccagggcccgccgggtcggcccggcagc
cccgggcaggtaggaaggcccgggagtccaggcaccacaggaccggctggcccaccagga
tactgtgaccagaactcctgtctgggatacaacgttggagttcaacaggactatgggaat
gaatactga
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integrated database retrieval system
