Betta splendens (Siamese fighting fish): 114842470
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Entry
114842470 CDS
T08231
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03320
PPAR signaling pathway
bspl04148
Efferocytosis
bspl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114842470 (rxrbb)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
114842470 (rxrbb)
03320 PPAR signaling pathway
114842470 (rxrbb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114842470 (rxrbb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bspl03310
]
114842470 (rxrbb)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
114842470 (rxrbb)
Nuclear receptors [BR:
bspl03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
114842470 (rxrbb)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
114842470
NCBI-ProteinID:
XP_028983837
UniProt:
A0A6P7KMQ2
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Position
16:complement(14731206..14737752)
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AA seq
440 aa
AA seq
DB search
MSSQQPNSSASNSPTSIIGSPFSVISPTLNSPVISPSLGFGPVSNSQISSSASISGMHSI
NSSEDIKPPFGLRPMPPHSPGAMLSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVSVKFLSRRHKFNLSEAVQEE
RQRNREREGELDFNVGVNEEMPVEKILEAETAVEQKTELHSDMGNSPHDAVTNICQTADK
QLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIALKDGVLLASELQRDS
AHGGGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNPDAKG
LSNTSEVELLREKVYASLEAYCKQRYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLI
GDTPIDTFLMEMLEAPHQLS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacagcaacccaacagttcagcctccaacagccccaccagcattataggttct
cctttctcagtcatcagtcccacacttaactccccagtgatttccccttctctgggattt
ggacccgtcagcaacagtcagatctcttcttcggcatctatatccgggatgcactcaatc
aacagctcggaggacatcaagcctccatttggtttgaggcccatgccacctcacagccct
ggagcaatgctgtctcagaaacgcatgtgtgtcatctgtggcgaccgctcttctggtaaa
cattatggtgtatacagctgtgagggttgcaagggtttctttaagcgaaccgtgcgcaaa
gacctgagctacacctgcagggataacaaagaatgcctagttgacaaacgccagcgcaat
cgctgccaatactgccgctaccagaagtgcctggccatgggcatgaagagggaagctgtt
tctgtcaagtttttgtcaagacggcataaattcaatctttctgaagcggtccaggaggag
cgccagaggaaccgagagcgcgagggagagctggacttcaatgtaggagtaaatgaggag
atgcctgttgagaagatcttggaggcagagacggcagtggagcagaagactgagcttcat
tctgacatgggcaactctccccatgatgctgttaccaacatctgtcagactgcagacaaa
cagctgtttgccttggtggagtgggcaaagagaatccctcatttctctgaactgcctctt
gatgaccaagtcattcttctgcgtgcagggtggaatgagctcctcattgcctccttttcc
catcgttccattgctttgaaggatggagttctcttggcctccgagttgcagcgcgacagt
gcacatggtggaggagtgggagccatttttgaccgggagagtgtgcagagcgcagaggtc
ggtgccatatttgacagagtccttactgagcttgtcaacaaaatgagagatatgcaaatg
gacaaaacagaattgggatgcctccgagccatcgtcctcttcaatccagatgctaaaggt
ctctccaacactagtgaggtggagctccttagggaaaaggtctatgcatcattggaagcc
tattgcaaacagagatacccagagcagcaaggaaggttcgccaagctcctgcttcgactg
ccagcgctgcgctctattggcttaaagtgcttggagcatcttttcttcttcaagttgatc
ggtgacacacctattgacactttcctcatggaaatgcttgaagctccccatcagttgtct
tag
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