Betta splendens (Siamese fighting fish): 114842655
Help
Entry
114842655 CDS
T08231
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bspl03016
]
114842655 (cdkal1)
Enzymes [BR:
bspl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
114842655 (cdkal1)
Transfer RNA biogenesis [BR:
bspl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
114842655 (cdkal1)
Prokaryotic type
Methylthiotransferases
114842655 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
114842655
NCBI-ProteinID:
XP_028984212
UniProt:
A0A6P7KUG7
LinkDB
All DBs
Position
16:16303879..16441303
Genome browser
AA seq
556 aa
AA seq
DB search
MPSACDSLIEDIEDMVSFGDPTPHERQSSRKSVVPRARKKKESVSNEELQADSLIPGTQK
IWMKTWGCSHNSSDGEYMAGQLASSGYQMTDDPTEADLWLLNSCTVKNPAEDHFRNSIRK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPVEELVERARQS
FQEGVCEVWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFQRVVDFLKERVPGVTIATDVICG
FPGETEDDFQATMDLVKCYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKALSQLFH
SYNPYDHEVGQRQRVLVTEESFDAQYYVAHNKSYEQVLVPKRPEFKGKMIEVDIYEAGKH
YLKGRPVEDSEPFTPSIAAPLEKGEVSGLMQVANGVQAAPALLVGSYSLDREVLKKLGMG
LVLAAAVLAFVVEKLY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagcctgtgactctctgatcgaagacatagaggacatggtgtcgttcggtgac
cccactcctcacgagagacaatcttctagaaagagtgtcgtcccaagggccaggaagaaa
aaggaatctgtgagcaacgaggaactacaagctgacagcctgatccctggaacacaaaag
atctggatgaaaacatggggctgcagtcataacagctctgatggggagtacatggctgga
cagctggcttccagcggatatcaaatgactgatgacccaacagaagccgacctgtggctg
ctcaacagctgcaccgtaaaaaaccctgcggaggaccacttcaggaactccatcagaaag
gcccaggaacaacagaagaaggtggtggttgcgggttgcgttccccaggcccagccgcgc
atggactacctcaaagggctcagcatcattggggtccagcagattgatcgagtggtggaa
gtggtggacgaggccgttaaaggccactcagttcgtctgttgggtcagaagaaagacgga
ggccggaggctcggaggggcgcgactggacctacccaagatcaggaagaaccctctgatt
gaaatcatctccattaacactgggtgtctgaacgcatgcacctactgtaagactaagcac
gccaggggggacctggccagctatcccgtggaggagctggtggagcgagcccggcagtct
ttccaggagggagtgtgtgaggtctggctgaccagtgaagacacaggcgcttatggcagg
gacatagggacagacctgcccacgctgctgtggaggctggtggaggagattcctgaagga
gccatgctgaggctgggtatgaccaacccaccgtacatcctggaacacctagaggagatg
gccaagatcctgaaccacccgcgtgtctatgctttccttcacgttcccgtgcagtcggcc
tccgacagcgtcctgatggacatgaagagggagtattgcatcgatgacttccagagagtg
gtggacttccttaaggagagggtcccaggtgtaaccatcgctacagatgtgatctgtggt
tttcctggggagacggaggacgacttccaagcaacgatggacttggtgaaatgctacaga
ttcccaagtctgttcatcaaccagttttaccccagacctggcacgcccgccgccaagatg
gagcaagtaccagcccatgtgaagaagcagaggactaaagcgctgtctcagctcttccac
tcctacaacccctacgaccacgaggtggggcagaggcaacgtgtgctggtgacagaggag
tcattcgacgctcagtactacgtggctcacaacaagtcctacgaacaggtactggtaccc
aagaggcccgagttcaaaggaaagatgattgaggtggacatctacgaggcaggaaaacac
tacctgaagggacgtccggtggaggacagcgagcccttcacgccgtccatcgctgcaccg
ctggagaaaggagaagtgtccggtctgatgcaggttgccaacggcgtccaagctgctcct
gctctgctggtgggctcctacagtctggacagggaggtgctgaagaagctggggatggga
ctggtgctggcagccgccgttttggccttcgtggtggagaaactgtactga
DBGET
integrated database retrieval system
