Betta splendens (Siamese fighting fish): 114842768
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Entry
114842768 CDS
T08231
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114842768 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114842768 (cnot3a)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114842768 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114842768 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114842768
NCBI-ProteinID:
XP_028984450
UniProt:
A0A6P7KSD6
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Position
16:complement(12431445..12438319)
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AA seq
906 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRYHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNMDDEMYLHSSSTPPSTTSSSPILPSPATCTAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGGISVVPTSSNLIGSFSSAVQQHQHQP
AQQQQQLPPPNQPQQQPPQSKPSVPSNNTPSPPSNPLLPVSSVPSLPTPSTPNSSTPNSQ
SQTTSGPSPASSLGLGLGLGLNKGGMTGTSSANQMSGLGLGGHSTALNTMSGLISGSTPA
PYAQAAASGGLGLTSGTQSVESSPSISTSGSSGVTTNGAGTGLGLLGSSPAHNSLSGSIL
GLIPGQGVAPGSSQVPSSSVSTTSGVVGMMGGSGGNIGVVGGVGVNAAPARPPSGLKQNG
STSYSAVVAESSTESALSTPNQSQSSQPSSLSSSASQPMDNGPSLISSITLPPSSPSPSF
SDSTPGGGSLLNGPQSFTQASEGLKAPEPLSSLKAMAERAALGSGLDGEIPNLHLTDRGQ
NDIFSSSSAAPGTPAAPQPSVSEVNIPPSLGVCPLGPTPLPKDQLYQQAMQEAAWTHMPH
PSDSERIRQYLMRNPCPTLPFHHHIPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLS
AKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYL
EDRDLQ
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgagatcgatagatgtttgaaaaaagtatctgaa
ggcgtagaacagtttgaagatatctggcaaaagctccacaatgcagccaatgcaaaccag
aaagaaaaatatgaggctgatctcaagaaagaaattaaaaaactacagcgattgagagat
cagattaaaacatgggtggcctcaaacgagatcaaagacaaaaggcagctagtcgagaac
cgcaaactcatagagacgcaaatggagcggttcaaggtggtggaacgtgaaacaaaaacg
aaagcctactctaaagaaggtttgggactcgctcagaaagtcgatccagcgcaaagagaa
aaggaagaaacgggacagtggctaacaaatacaatagacactctaaatatgcaggtggat
cagtttgaaagtgaggtggaatctctttctgttcagactagaaagaagaagggtgataag
gaaaagcaagatcgcatcgatgagctgaagcggttgattgagaggcatagataccacatt
cgcatgttggagaccattttacgaatgctggacaatgactctgtgccagtggatgcaatc
cagaaaatcaaggatgatgttgaatattacatagattcctcccaagatcctgactttgag
gagaacgagtttctgtatgacgacttagacctagaagatatccctgcagcattagttgca
acttcgccatctggtcaaggcaacatggacgatgagatgtatctccactccagctccacc
cctccttccaccacctcatcctcacccatccttccatccccagccacttgcactgctgag
aactcagaggacgataagaaaagaggacggtcgacagacagtgaagttagtcagtcacct
gtgaagaacggcaccccatccttgctatcttccttctcgtcctctaccacctctgggtcc
tcctcatcctcttcccttgtttccatggccagtgttgttggaggtatttctgtggtcccc
acaagcagcaatctaataggaagcttcagcagtgcggtgcagcaacatcagcatcaacct
gcacaacagcagcaacaacttccaccaccaaaccaaccgcagcaacagccacctcagtca
aagccctctgtgccctcaaataacacccccagtcctcccagcaaccccctactgccagtt
tcttctgttccctctcttcctacacctagtacacccaattcatcaactcccaactctcag
tctcagaccacatctgggcctagcccagcatccagtttaggacttggattggggctgggc
ttgaacaaaggtggcatgacggggaccagcagtgccaatcaaatgtctggtttgggcctg
ggtggccactctactgctctaaacacaatgtcagggctcatttccggttctacacctgcc
ccttacgcacaggctgctgcatctggaggtttaggtttgaccagcggaacccaatctgta
gagagtagcccctccatctccacctctggctccagtggagtcaccacgaatggtgcaggg
acaggtcttggtttgcttggctccagcccagctcacaactctctaagtgggagtattttg
ggcctaattcctgggcagggtgtagcaccaggcagctctcaggtgccctcaagttctgtc
agcactacctccggggtagtgggcatgatgggaggcagtggagggaatattggagtggtt
ggcggagtaggggtgaatgctgctcctgctagaccaccaagcggactgaagcaaaatgga
agcacaagttacagtgctgtagtggcagagagctccacagaatcagctctcagcacaccg
aaccagtcacaaagcagccaaccctcatctctcagttcttctgcaagtcagccgatggac
aatggccccagtttaatcagctccatcactttgcctcccagctctccgtccccctcattc
tcagacagcacacctggaggaggaagcctgctcaatgggccccagtccttcacacaggcc
tctgagggcctcaaggctccagagcctctcagttctctgaaggcaatggctgagagagca
gcgctgggatcaggcttggatggagagattcccaacctccacctaacagacagaggtcag
aatgatatcttctccagttcatctgcagcgcctggtacacctgctgcccctcagccgtcc
gtgtcagaggtcaacatcccaccctcacttggggtctgcccactgggtcccacccctctc
cccaaagaccaactctaccagcaggccatgcaggaagctgcatggacacacatgccacac
ccctcagactcagagaggatcaggcaatacctgatgaggaacccatgtccaaccttgccc
ttccatcatcacataccacctcatcattcggactccatagagttttaccagagactttca
acagagactctgtttttcatcttctactacctggagggcaccaaggctcagtatctctct
gccaaggctttgaagaaacagtcatggaggtttcacacaaagtacatgatgtggttccag
aggcacgaagagcccaaaacgatcacagatgagtttgaacagggcacttacatttacttt
gactatgagaaatggggccagaggaagaaggaggggttcactttcgagtacaggtacctt
gaagacagagaccttcagtga
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