Betta splendens (Siamese fighting fish): 114842896
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Entry
114842896 CDS
T08231
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114842896 (sox1b)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114842896 (sox1b)
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114842896
NCBI-ProteinID:
XP_028984761
UniProt:
A0A6P7KQL7
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Position
2:complement(9375123..9426543)
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AA seq
356 aa
AA seq
DB search
MYSIMMETDLHSPVVPQTNPSNPGGHPGGGGGGAGGKVPQDRIKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKLMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT
LLKKDKYSLAGGLLGSSGAVGMGGGQRLESPGGAHAGANAAYATHMNGWANGAYSGQVAA
AAAAAHAMMQEAQLAYTQHPGTGAHPHHPHAHHPHAHHPHAHNPQPVHRYDMSALSYSPI
SNSQSYMSASPPGYGGITGYTHQHQSSGVSPVSGTIGGTLGSLVKSEPSVSPPVSTARAP
PPCPTGDLRDMISMYLPTGEAAGDSSVQSRLHVLHQQHYQSSASTPVNGTVPLTHI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacttacattcccccgtggttccccagaccaaccca
tccaacccggggggacacccgggaggaggaggcgggggggccggaggcaaagtcccccag
gacagaatcaagagacccatgaacgcgttcatggtgtggtcccggggccagcgcaggaaa
atggcccaggagaaccccaagatgcacaactccgagatcagcaagcggctgggcgccgag
tggaagctgatgacggaggcggagaagcggccgttcatcgacgaggcgaagcggctccgg
gccatgcacatgaaggagcacccggactacaagtaccggccgcggcggaagaccaagacg
ctgctgaagaaggacaagtactccctggccggcgggctgctcggctcctccggggccgtc
gggatgggcggcgggcagcgcctggaaagccccggaggggcccacgcgggggccaacgcc
gcctacgccacgcacatgaacggctgggcgaacggcgcctactcgggccaggtggcggcg
gcggcggcggcggcgcacgccatgatgcaggaggcgcagctggcgtacacgcagcacccg
ggcaccggggctcacccgcaccacccgcacgcgcaccacccgcacgcgcaccacccgcac
gcgcacaacccgcagcccgtgcacaggtacgacatgagcgccttgtcctacagcccgatc
tcaaactctcagagctacatgagcgcctcgccgccgggctacggcggcatcaccggctac
acccaccagcaccaaagctccggcgtctccccggtgtccgggaccatcggagggactctg
ggctcgctcgtgaaatccgagcctagcgtgagtcccccggtttccacggcgcgcgcgccg
ccgccgtgccccacgggagacctgcgggacatgatcagcatgtacctgccgaccggcgag
gcggcgggggactcgtccgtgcagagcagactgcacgtgctccaccagcagcactaccag
agcagcgcctccactccggtaaacgggacggttcccctgactcacatttaa
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