Betta splendens (Siamese fighting fish): 114842947
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Entry
114842947 CDS
T08231
Symbol
pwp2h
Name
(RefSeq) PWP2 small subunit processome component
KO
K14558
periodic tryptophan protein 2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114842947 (pwp2h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114842947 (pwp2h)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114842947 (pwp2h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WDR55
Utp12
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
Ge1_WD40
WD40_like
eIF2A
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_DCAF4
DUF1513
UTP15_C
Utp13
Motif
Other DBs
NCBI-GeneID:
114842947
NCBI-ProteinID:
XP_028984892
UniProt:
A0A6P7KQJ8
LinkDB
All DBs
Position
2:complement(335099..343191)
Genome browser
AA seq
913 aa
AA seq
DB search
MKFAYRFSNLLGAVYRQGNLNFSKDGNAVVSPVGNRISVFDLKSNTSETLPISTTKNISC
VGLSPDGNLAVVVDEDGAALLVSLVTRAILHHFHFHKPVNSIRFSPDGRKFVVTKENVAL
MYHAPGKQREFNAFVLDKSFYGPYDETTCIDWTDDSKCFVVGSKDMSTWVFGAERWGNLI
YYSLGGHKDVIVGCFFEKDSLDLYTVSQDGALCVWKSNTKLGELILMKNQDKAKYLSQRD
DEDDDDKEERMEGEDGVVIRGKSEAPKDKTSKNVRYQQRGKHFFNKEGDFNNLTAAAYHK
PSHILVTGFASGIFHLHELPDFNLIHSLSISDQRISSVAINSSGDWIGFGCSGMGQLLVW
EWQSESYVFKQQGHFNNMASVAYSPDGQYIVTGGDDGKVKVWNTSSGLCFVTFTEHTSSI
TNVTFTSSGFVIVSASLDGTVRAFDLHRYRNFRTFTSPRPAQFSSLAVDVSGELVSAGAQ
DSFEIFLWSMQTGRLLEVLGGHEGPVSCLCFSPVQSILASASWDRSIRLWDMLNSWQVKE
TLPLSSDVLAVTYRPDGQELAAATLNGEISFWNPHTATQTGSVVGRHDLEIGRKDTDKIT
AKQSAKGKSFTSLCYSADGEAILAGGQSKFVCIYNVKEQMLMRKFEISCNLSFDAMEEFL
DRRKMTEFGSLALVDEGAGDGDGVNISLPGVRKGDMSSRHFKPEIRVSSLRFSPTGRSWA
ATTTEGLLVYSLDGSMVFDPYDLDLDVTPASICKQLRLQDWTSAIVLAFRLNEKALKEEV
LETVPHEQIPVVCRALPDIYVEKLLDFVAACLEKSSHLQFYMTWTQNLLMLHGQKLKNRS
GAILSTLQALQKSIQRHSDNLSKLCDFNMYNIRYAAALSKQRGVKRTAQEEKDDDEQSEE
MSEASLEDAELML
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgcttataggttttccaatctgctcggagcagtttatcgtcaggggaatctg
aatttctctaaagatggcaacgcagtggtcagtcccgttggaaacagaatatccgtcttc
gacctgaaaagcaacacatcggagacgttgcccatctcgactacaaagaacatttcatgt
gtgggtctctctccggatgggaacttggcagttgtggtggatgaagatggtgcagctttg
ttggtcagtctcgtcacccgggcgatcctgcatcatttccactttcacaaacctgtgaac
agcatccgcttctcacctgatggcaggaaatttgttgtcactaaggagaatgtagctctg
atgtaccacgctcctgggaagcagcgtgagtttaacgcctttgtgctagacaaaagcttc
tatggtccctatgatgaaaccacctgcatcgattggacggacgactccaagtgttttgtg
gtgggcagcaaagacatgtcaacatgggtgtttggcgcagagcgttggggtaacctcatc
tactactctctgggtggacacaaggatgtcattgtaggatgtttctttgagaaggacagc
ttggatctatacacggtaagccaggatggggcgctttgtgtgtggaaaagcaacacaaag
ctaggtgaacttatcctgatgaaaaaccaggacaaagcgaagtatctgagtcagagggac
gatgaggatgatgatgataaggaggaaaggatggagggagaagatggtgttgtcatcaga
ggtaaatctgaagctcctaaagacaaaacatctaagaatgttcgataccagcagaggggc
aaacacttcttcaacaaagaaggggactttaataacttgactgcagccgcttaccacaaa
cccagtcacattctggtcactggctttgcctctggtatcttccacttgcatgaacttcca
gactttaaccttatccactctttaagtatttcagatcagagaatctcttctgtagctata
aacagctctggagactggattggatttgggtgctcaggtatgggtcagttactggtttgg
gagtggcagagcgagtcatacgtcttcaagcagcaaggacactttaacaacatggcttct
gtcgcttactcaccggatggacagtacattgtaactggaggggatgatggcaaagtcaaa
gtgtggaacaccagcagtggcctctgcttcgtcacctttacagagcacaccagcagcatc
accaatgtcaccttcacctccagtggctttgtcattgttagcgcttctttagacggaact
gtcagagcgttcgatctacacaggtaccgaaactttcggacgttcacgtcacctcgaccc
gcgcagttctcctcccttgctgtagatgttagtggagaacttgtaagcgcaggagctcag
gactcgtttgagatcttcctctggtccatgcagacaggcagattactagaggttcttgga
ggccatgaaggtccagtcagctgcctgtgttttagtccagttcagtccatcctagctagt
gcctcatgggaccgcagtatccggttgtgggacatgttgaacagctggcaggtcaaggaa
actcttcccctcagctctgatgtgttggcagtgacataccgtcctgatggtcaggagttg
gcagcggctactctgaatggcgagatctccttttggaatcctcacacagccacacaaact
ggttctgtggttggccgccatgacctggagataggccgcaaagatactgataaaattaca
gccaaacagtcagccaagggcaagtccttcacatcactatgttattcagccgatggtgag
gctattttggcaggaggacagtccaagtttgtctgcatctacaacgtgaaggagcagatg
ctcatgaggaagtttgaaatctcctgtaacttgtcctttgatgccatggaggagtttctg
gatcgccggaagatgacagagtttggcagcctggctttggtggatgagggtgctggagat
ggagacggtgtcaacatcagcctccctggagtcaggaagggtgatatgagttctcgtcat
ttcaagccagagatcagagtcagctcgctgcggttttcacctaccggtcgtagctgggct
gcaaccaccactgagggcctgctggtctactcccttgatgggtctatggtctttgaccct
tatgaccttgatctggatgtgacaccagccagcatatgcaagcagttgcggcttcaggac
tggacgtcagccatcgttctggcatttaggctcaatgaaaaagcactcaaggaggaagtg
ctggaaactgtgccacacgagcagataccggtggtgtgcagggctcttcctgatatttat
gttgaaaagctgctggacttcgtggcagcatgtttagagaagtcgagccacctgcagttc
tacatgacatggacccagaacctgctcatgctgcacggacagaaactcaaaaacaggtcg
ggagctatactgtctaccctgcaggcactgcagaagagcattcagagacattccgacaat
ctttcaaaactgtgtgactttaacatgtacaacatacgttatgcagcagccctttcaaag
cagaggggtgtaaagaggacagcacaggaagaaaaagatgatgacgagcagtctgaggag
atgagcgaagcatccttggaagacgcagagttgatgctgtaa
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