KEGG   Betta splendens (Siamese fighting fish): 114843001
Entry
114843001         CDS       T08231                                 
Symbol
rbm8a
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
bspl  Betta splendens (Siamese fighting fish)
Pathway
bspl03013  Nucleocytoplasmic transport
bspl03015  mRNA surveillance pathway
bspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114843001 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    114843001 (rbm8a)
   03015 mRNA surveillance pathway
    114843001 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bspl03019]
    114843001 (rbm8a)
   03041 Spliceosome [BR:bspl03041]
    114843001 (rbm8a)
Messenger RNA biogenesis [BR:bspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114843001 (rbm8a)
Spliceosome [BR:bspl03041]
 Complex C
  Other components
   EJC/TREX
    114843001 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 114843001
NCBI-ProteinID: XP_028984976
UniProt: A0A6P7KR92
LinkDB
Position
16:complement(7724372..7726945)
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWXFVRGPPKNKRRAGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgttttggatcttcacgaagcgggaggcgaggactttcctatggatgaggat
ggtgatgaaagcatccacaagctaaaagagaaagccaagaaaaggaagggacgaggattc
ggttcagaggaaggagccaggtctagaatcaaagaggactatgacaccgtggaacaagat
ggagacgagccaggtcctcagagatctgtagagggctggatcctgtttgtgacgggtgta
cacgaagaggccacagaggaagacatccacgacaagttttcagagtttggtgaaattaag
aacctgcatctcaaccttgaccgcagaacaggttatctcaagggttatgctctggtggag
tatgaaacatacaaggaagcccaagcagccatggaagggctcaatggtcaagacatgatg
ggtcagcccatcagtgtggattggngattcgtcagagggccccccaagaacaagagaagg
gccggtggacggaggcgcagcagaagtccagacaggaggcggcgttga

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