Betta splendens (Siamese fighting fish): 114843131
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Entry
114843131 CDS
T08231
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114843131 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bspl03041
]
114843131 (dhx16)
Enzymes [BR:
bspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114843131 (dhx16)
Spliceosome [BR:
bspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
114843131 (dhx16)
Complex C
U4/U6.U5 tri-SnRNP related factors
114843131 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
Flavi_DEAD
nSTAND3
PWI
Motif
Other DBs
NCBI-GeneID:
114843131
NCBI-ProteinID:
XP_028985214
UniProt:
A0A6P7KX65
LinkDB
All DBs
Position
16:7309209..7321289
Genome browser
AA seq
1049 aa
AA seq
DB search
MANLEQWVNDRLHDILGLSDRYVSQFMIGTAQKASSAQDFLSRLEQTGTIDIDQSVIAFA
EDLYEKIPRKQVAEKPSRAIERQAIEMDRKNRTYTLLEDSESDGDTVKEKQKGKKTSRDR
ESKRKHIRQKKESESSSEDEAPDRGNSGQSAKKEEEEVEEEWEKEERERLQDIEERDAFA
ARVRQKDKEKTRNIAERTDKKAYEEAQKRLKMAEDDQKNMLPELRKRSRWEYLKKRESEK
LEDLEAEIHDEEYLFAKENLTKREHKELQYKRTLRDLAKDYKKAGAKEHEERKNRYYMPE
ETRNKDVPQRDLELEETPMELGGEQGRWEEERLKTASLSFGAKKEREQGMKQEKERYQLI
LEEDEMIDFVSTAITMKGTRSEKEQEAPALSQAELKKQSMQEVRRSLPIFPYREDLLAAI
HEHQILVIEGETGSGKTTQIPQYLLEDGYTKGGMKIGCTQPRRVAAMSVAARVAEEMSVK
LGNEVGYCIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDIL
FGLIKDIARFRSDLKVLVASATLDTERFSCFFDDAPVFRIPGRRFPVDIYYTKAPEADYL
EACVVSVLQIHVTQAPGDILVFLTGQEEIEACCELLQERCRRLGSKIAELLVLPIYANLP
SDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESLIVT
PCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGI
NDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASE
QYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHLVLLNVYTQWVESG
YSTQWCYENFIQFRSMRRARDVRDQLEGLMDRIEVEVVSCQGDCIPVRKAVTAGYFYHTA
RLSKGGYKTVKHQQTVYVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIEIDSGWLLEVA
PHYYKSKELEDSSSKKMPRKQGKTKEELG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttagagcagtgggtcaatgaccgtctccatgacatccttgggctgagcgac
agatatgtgtctcagtttatgatcggcacggcacagaaagcttcaagtgctcaagacttt
ctgagtcgtcttgagcagacaggcactattgacattgaccagagtgtgattgcctttgcg
gaggacctctatgaaaagattcctcgcaagcaggttgctgagaaaccatcccgtgcaatt
gaacgacaagccattgaaatggacaggaagaatcggacgtacaccttactggaagacagc
gaaagtgatggagacactgtgaaggagaagcagaaaggaaaaaagacaagccgggacaga
gaaagcaaaaggaagcacatcagacaaaagaaagagagcgagtcatctagtgaggatgaa
gcacctgataggggtaattcagggcagtctgccaagaaggaagaagaggaggtggaagaa
gagtgggagaaggaagagagggaaagactgcaggacattgaagagagagatgcgtttgct
gcacgagtgagacagaaggacaaagagaaaacacgcaacatagctgaaagaactgataaa
aaggcttatgaggaggctcagaaaaggctgaagatggctgaagacgatcaaaaaaatatg
ttgccagagttgaggaagcgttctcgttgggagtatttaaaaaagcgagagtcggagaag
ctggaggacctggaggcagagatccatgatgaggaatatctttttgccaaagaaaaccta
actaagcgggagcataaggagctgcaatacaaacgcactcttcgggacctggctaaagat
tacaagaaagctggagcgaaggaacacgaggagcggaagaacagatattacatgccagaa
gaaacgagaaacaaggacgtgccgcaaagagaccttgagctagaagaaactcctatggag
ctgggaggagagcagggccgctgggaggaggagaggctgaaaacagcctcccttagcttt
ggggccaagaaggagagagagcaggggatgaagcaggaaaaggagaggtatcagctgatc
ctggaagaggatgagatgatcgactttgtcagcactgccattactatgaagggaacccgg
tcggagaaggagcaggaggccccagctctctcacaggcagaactaaagaagcaatccatg
caggaggttcggcgcagcctgcccatcttcccttacagagaggacctgttagctgccatc
catgagcaccagatcctggtcatagagggagagacaggctctggaaagaccacccagatc
ccgcaatacctcctagaagatggctacactaaaggaggcatgaagatcggatgcacacag
cctcgcagagtggcagccatgtctgtggctgctagggtggcagaggaaatgagtgtaaaa
cttggtaatgaggtgggttactgtatccgctttgaggactgcacatcagagaggacggtg
ctgaagtacatgacagacggaatgttacttcgggagtttctcactgagcctgacttggcc
agctacagtgtaatcatcatagatgaggcccatgagcgaactctacacacagacatcctg
tttggtctgattaaggacattgccaggttcagatcggacctgaaggtgctggtggccagc
gccactctggacactgagcgcttttcttgcttctttgatgatgcacctgtcttcaggatc
cctgggaggaggttccccgtcgacatctactacacaaaagctccagaggcagactacctt
gaagcatgtgtagtgtcagtcctacagatccacgtcactcaggctccaggagacattttg
gtcttcctcactggacaggaagagattgaagcgtgttgcgagctgctccaggaaagatgc
aggcgacttggatcaaagatagcagagctgctggtacttcccatctatgccaacctgccg
tctgacatgcaggccaagatcttcaaccccactccacccggtgcccggaaggtggtggtg
gccaccaatatagcagaaacctcactgaccatagatgggatcatctacgtcattgacccg
ggcttctgcaaacagaagagttacaacgcccgcaccggcatggagtcgctcatagtcacg
ccctgttcacgggcgtcggcaaaccagagagctggccgcgcaggcagagtggctgctggg
aaatgtttccggctttacacagcctgggccttcaaacacgagatggaggaaacaaccgtg
cctgagattcaaaggaccaacctggggaatgtagtcctgctgctgaagagtttaggcatc
aatgaccttattcactttgacttcatggacccacccccccatgagactctggtgttggcg
ctggagcagctctatgcccttggagcgctcaaccacctgggggaactgacaaagctggga
cgcaggatggctgagctacctgtggaccccatgttgagcaagatgatcctggcctctgag
cagtacaagtgttcggaggaagtgttgacgatagcagcgatgctgtcggtgaacaactcc
attttttaccggcccaaggacaaggttgtgcacgctgacaacgccaggatgaactttgtg
gtgccagggggagaccatctggtgctgctcaacgtctacacacagtgggtcgaaagcggc
tactctacccagtggtgctatgagaattttatccagttccgctctatgagaagagcccgc
gacgtcagggaccagctggagggcctgatggaccgcatcgaggtggaggtggtcagctgc
cagggagactgcattccagttcgcaaggcagtgacagctggttatttctatcacaccgca
cgacttagcaaaggtggctacaagacggtgaagcaccagcagacggtctacgtccacccc
aacagctctctgtttgaggagcaaccacgctggctcatctaccacgagctggtcttcacc
accaaggagttcatgagacaggtgatcgaaatagatagcggctggctgcttgaagtggct
cctcattactacaagagcaaagagctggaggacagcagcagcaagaagatgccgcgcaag
cagggcaaaaccaaagaggagctgggctga
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