Betta splendens (Siamese fighting fish): 114843256
Help
Entry
114843256 CDS
T08231
Symbol
pop1
Name
(RefSeq) LOW QUALITY PROTEIN: ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114843256 (pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114843256 (pop1)
03016 Transfer RNA biogenesis [BR:
bspl03016
]
114843256 (pop1)
03029 Mitochondrial biogenesis [BR:
bspl03029
]
114843256 (pop1)
Enzymes [BR:
bspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
114843256 (pop1)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
114843256 (pop1)
Transfer RNA biogenesis [BR:
bspl03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
114843256 (pop1)
Mitochondrial biogenesis [BR:
bspl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
114843256 (pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
114843256
NCBI-ProteinID:
XP_028985467
UniProt:
A0A6P7KS97
LinkDB
All DBs
Position
16:20829817..20836482
Genome browser
AA seq
969 aa
AA seq
DB search
MSGAKVKMREKKMRNQPLSVQYPSAAMDAGSSTQNGRGTSTTDRQGPAHHRGGWLRGHQR
DRGGYAKEMPRHLTGGYFAKARAAEVSAMLKAVKKTTGSCHVFGALPKHMRRRSMSHNIK
RLPHRLREVASRMREKSLQAGAKKKEQTKSKSRKARRRHGNLLLEFNRRQRKNKWLETHI
WHAKRFHMVKKWGYCLGDRPTCKCYRPCYRAMSSHCLLQDLSYYCCIELQGEEDRLLASL
SQLTSKETGPTFSAALCVSGRRQGSVVMYRAERYPSQALGPVSFLWRPRKQGSTHRQLWI
WAHPTMKQELLSELQTVCQCFEAVVTPVVPVVLPPTKVVSTLELELKADETPEATQVPRA
KRKRSCKDVAEPPAKKILGDGTRSPSTPISWKSSSTGIVINDLTMEIVRYRLIGPHSHSV
LTETLDAATDCNEITKSHPSSLWWPEHCKDESKMTLHQQQTDIFHTLKGIYSSAELPSGT
VLGLTVDDPRLTLPTKKVKALPCVKKAQEVDEEKRRELMLRGAPEDCCQSFLWEQSVRDN
VTENKISEQELNRMRSEVLVPGTRLRPTPLQGRVPVLLVHQPGKQVGHEMSSWGAGWDLL
LPKGWGMAFWVPLVYRGVRIGGLNMSLKHSQNKGAPHFPHDYPDCQAGVRFQEEQEAELL
NKFKRRPPAKRTNYIKHGCLAPFRCPWQQLVEEWELITKEGREERKGDSQTPNVTGSDTI
TEEMTSPPDIGVTKPPSHFTVLRNQKSLRILSLWCRPSTSKGQRLCRVRDVAPLDSSAVT
AFLSAHTMSLVWVRLSLLSKGKPELHGMICAPVVEDLKLLGKKVDIQGPQEPPHKNHVKS
LIKRKKTGSKKAAPSSKTEGKGSDNATEPDPAAAAEGLKTSPESSTDATLGLWPDPLPSI
TSHCSRVTLGWVTQGDFSLSAGCGEALGFVSVAGLLHTLLSQPKEHRGVLLLRNPTSLHY
RFVKINIEV
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgccaaagtgaagatgcgggagaagaagatgaggaaccagcctctcagtgtg
cagtacccgtctgctgctatggatgcagggagcagcacccagaatggacggggcacctcg
accactgatagacaggggcctgcccatcacaggggtggatggttgcgtggacaccagaga
gacagagggggctacgctaaggaaatgcccagacacctgaccggtggttattttgccaag
gccagggctgcagaggtgagcgctatgttgaaagctgttaagaagacaacaggcagctgc
cacgtgttcggagcgctgcccaaacacatgaggcgacgctccatgagccacaacatcaag
cggcttcctcacagactgagagaagtggccagtagaatgcgagaaaagagcctccaggct
ggagcgaagaagaaggaacagacgaagagcaagagccgcaaagcacggcgtcggcacggc
aacctgctgctggagtttaaccggcgtcagaggaagaacaagtggctggagacgcacatt
tggcatgccaagcgcttccacatggtgaaaaagtggggttactgccttggggatagaccc
acgtgtaaatgttaccgcccctgctacagagccatgagcagccactgtttgttgcaggat
ctctcgtactactgctgcatcgagctgcaaggagaggaggacaggttactggcatctcta
tcccaactaacaagcaaggagactggtcccacattttcggcagcgctgtgcgtatcgggg
cgtagacagggcagcgtggtgatgtacagagccgaacgttatccctcacaggccctgggc
cctgtcagctttctctggagaccccgtaagcaaggctctacacacagacagctgtggatc
tgggctcatcccactatgaaacaggaacttctctctgaattacaaactgtatgccagtgc
ttcgaggctgtggtcacaccagttgtgccagtggtattgccgcccacaaaggttgtttcc
accctggaactggaacttaaagctgatgagacccccgaggccacacaggtacccagggct
aaaagaaagcgcagctgtaaggatgttgctgaacctcccgctaagaagatcctgggggat
ggaaccaggtccccctctacccccatcagctggaagtccagctcaacaggaatagtcata
aatgatctcaccatggagattgtgcgctatcgcctgattggaccacattcccattctgtg
ctgactgaaaccttggatgctgctacagactgcaatgaaatcaccaaatcccatccctcc
tccctctggtggcctgagcactgcaaagacgagagcaagatgactctgcaccaacagcaa
acagacatctttcacacactgaaaggcatctattcatctgcagagctcccctcaggcact
gtactgggcctgactgtagatgaccccaggctgactttacccacaaagaaggttaaagct
ttgccctgtgtgaagaaggcacaagaggtagatgaagaaaagaggagggagctgatgttg
cgtggcgcaccagaggactgctgtcagagtttcctgtgggaacagtctgtgcgggacaac
gtcactgaaaacaagatatcagagcaggagctgaaccgcatgaggagcgaggtgctggtg
ccgggcacccggctgcgccccactcccctgcagggccgagtccccgtcctactggttcac
cagcctggcaaacaagtgggacatgagatgagctcctggggggctggctgggacctgctg
ctacctaaaggctggggcatggccttctgggtcccattggtatacagaggcgttcgcatt
ggtggtctaaacatgagtctgaaacactctcagaataaaggagcaccccacttccctcat
gattacccagactgccaagcaggcgttcgtttccaggaggagcaggaggctgagcttctc
aacaagttcaaaaggcgcccgcccgccaaaaggaccaattatatcaaacatggctgtctg
gccccgttccgttgcccatggcaacagctggttgaagagtgggagcttatcacaaaggaa
ggaagagaggagaggaaaggagacagccagaccccaaatgtaacgggcagtgacacaatt
actgaggagatgacttcacctccagatatcggcgtaacaaaacctccgagccacttcact
gtgctgaggaaccaaaagtctctgaggatcctctccctttggtgcaggccctccacatct
aaaggacagagactgtgccgcgtcagagatgttgcgccgctcgactcctcagctgtgaca
gcgtttctctcggcgcacaccatgagcctcgtgtgggtccgtctgtcactgctgtcgaag
ggcaaaccggagctacatggcatgatctgtgcaccggttgtagaagacctgaagctgctg
ggcaaaaaggtggacatccagggcccccaggagccgccacacaaaaaccatgttaaaagc
ctaataaagcgcaagaagacgggctccaagaaagcagctccatcctctaagactgagggt
aaaggatcagacaacgctactgaaccagaccccgctgctgcagctgaaggcctgaaaaca
tcccctgagtcctccacagatgccacccttgggctgtggccggatcctctgcctagcatc
acctctcactgctcccgtgtgacactaggctgggtcacacagggcgacttctccctgtct
gcaggctgcggggaggctctggggttcgtcagtgttgccggcctcctccacacgcttctc
agccagccgaaggaacacagaggagtgctgctattgcgcaaccccacctcccttcattac
cgctttgttaaaatcaacatagaggtctga
DBGET
integrated database retrieval system
