Betta splendens (Siamese fighting fish): 114843266
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Entry
114843266 CDS
T08231
Symbol
smarcc1a
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114843266 (smarcc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114843266 (smarcc1a)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114843266 (smarcc1a)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114843266 (smarcc1a)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114843266 (smarcc1a)
PBAF complex
114843266 (smarcc1a)
GBAF(ncBAF) complex
114843266 (smarcc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT
BRCT_2
DUF919
Motif
Other DBs
NCBI-GeneID:
114843266
NCBI-ProteinID:
XP_028985485
UniProt:
A0A6P7KV56
LinkDB
All DBs
Position
16:complement(7014874..7029882)
Genome browser
AA seq
1133 aa
AA seq
DB search
MATAATTAGGTGSGGPASGLVSGGSMVGRKKDGGPSTKFWESSETISQLETVRLWIGKHY
KKYVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPAKCFLDFKAGGALCHILG
SVYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKNLVQNNCLTRPIVFLSPDIEQKQSSK
LKDIIKRHQGSMTEDKSKATHHIYPSPSQQEEEEWLRPVLRKDKQVLVHWGLYPDSYDTW
VSAGEVDGDVEDPPNTDRAWKVHAKWVLDTDAFNEWMNEEDYEMDENKKPVCFRPRIFPK
EEESSRTPDRKERKANSAGKKRRRSPSPPSTPAESRKKGGKKGNPGSQWKRRGHRGEEED
TEEDITKDMDDSSAGASMEEGSVSKNASSKKDNENTPVKGGNVADLDDMEDESMVSGGKD
DEELGKAEVNRLIDAGEDNVTEQTHHIIIPSYAAWFDYNCIHEIERRALPEFFNGKNKSK
TPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLAGDVCAIMRVHAFLEQWGLVNYQVDSE
SRPLPMGPPPTPHFTVLADTPSGLMPLNHRPPPIPPPQIMPNFGDKSKEKPIDLQNFGLR
SDLYKKAAKGKAATSTREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRL
PIEDPYLESTESSLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSR
VREEVPAELVEAHVKKVQEAAKSTGKVDPTFGLESSGIAGTAPEEPEKTETTEPEKMDTD
SDSQQADKPELKDEAEKPSESAEKAEKTEATEKVKKEGAEAAEREEESEERVEAKAAAPE
KDKDEAMETSSSEQEKDKEEKSIPEEGDEKRKKLEHDIGEGNIATAAAAALASAATKAKH
LAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFH
MEQLKYAEMKARQQMEQQAAAAAAAAAQAQGQGQAPGSGPHPGPPPPGMHPGGPMPHHGG
PPSHHGGPPPHHGGPPPGAAMHPGYPPMGHHPMAPHHPGQTGPMGPGQPLPGRMMPGPPS
AGPPPGGMPPMIPPRHPGAPNGMYPGPPPTQPEALPPAPVGPPVPPSGRVADN
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcgacaacagcaggcggaacgggctcaggcggacctgctagcggcctg
gtcagcggcgggagtatggtgggacggaagaaggacggaggtccgtccacgaagttctgg
gaaagctcagaaacgatatcccagttggagacggtgcgtctgtggatcggaaagcactac
aagaagtatgtccagaatgattccccatccagtaagtcattggccggcctggtggtccag
ctgctgcagttccaggaggatgcatttgggcgtagggtcaataatcctgccctcaccaag
ctaccagccaaatgttttctggattttaaggcaggaggtgcgctttgtcacatcttggga
tcagtctacaagtttaagagtgagcagggatggcgccggtttgacctccagaatccctca
cggatggacaggaacgtggaaatgttcttaaatgtagagaaaaacctggtccagaacaac
tgcttgactcgaccaattgtcttcctgtcaccggacatcgagcagaaacagtccagtaag
ctcaaagacatcatcaaaagacaccagggctcaatgactgaagataaatcaaaggccacc
caccacatatatccctccccatctcagcaagaagaagaggagtggcttcgccctgtcctg
agaaaagacaaacaggtgctggtgcactggggtctctacccagacagctatgatacctgg
gtatcagccggtgaggtagatggtgatgtggaggatccacccaacacagacagggcctgg
aaggttcacgccaagtgggttttggacacagatgccttcaatgagtggatgaatgaggag
gactatgagatggatgagaacaagaagccagtttgcttccgcccacgaattttccccaag
gaagaggagtcttcccgtacacctgatcgcaaggagcgcaaggctaattctgccggaaag
aagaggaggcgctcgccctcaccgcccagcactcctgctgagtctcgcaagaagggagga
aagaaaggaaacccagggtctcagtggaagcgtcgaggtcaccgaggtgaagaggaggat
acagaggaggacatcaccaaggacatggacgattcatcggctggagccagcatggaggag
ggcagcgtgtctaaaaatgccagttcaaagaaagacaacgaaaacactccagtgaaagga
ggaaatgtggccgacttggatgacatggaagatgaatccatggtttctggtggaaaggac
gatgaggagctgggcaaagcagaggtcaaccgactgatagacgccggggaggacaacgta
actgaacaaactcatcatatcatcatccccagctacgctgcttggtttgactacaactgt
attcatgaaattgagagacgagcactaccagagttcttcaacgggaaaaacaaatctaaa
actccagagatatatctggcctaccgtaacttcatgattgatacttatcggctaaaccct
caagagtatctcacttccacctcctgccgtaggaatttggctggggatgtgtgcgccatc
atgagggtgcacgcattcttggagcagtggggtttggtgaactatcaggttgactcagag
agtcgcccgttgcccatgggccccccacccacaccccacttcacagtgctggcagacacg
ccatctgggctcatgcccttgaaccaccgacctccaccgattcctcctccacagatcatg
cctaactttggagataaaagcaaagagaagccaattgacctgcagaactttggtctccgc
tccgatctctacaaaaaagctgccaagggaaaagctgcgacctccaccagggaatggacc
gagcaggagactctgttgctcctagaggccctggagatgtacaaagatgactggaacaaa
gtgtctgagcatgttggttcgcggacccaagatgagtgtatattgcacttcttgcggctt
cccattgaggacccttacctggagagcaccgaatcctctctaggtcctctggcctaccag
cctatacctttcagccagtctggaaaccccgtcatgagcacagtagcgttcctggcctct
gtagtcgaccccagagtggcatctgctgctgctaaagctgcactagaggagttttcccgt
gtgcgtgaggaggtgcctgctgagctggttgaggcgcatgtgaaaaaggtacaggaggca
gccaagagcacaggaaaggttgaccccacctttggcctggagagcagcggcatagcaggc
actgccccagaggagccggagaagaccgaaaccacagaaccagagaagatggacacagac
tcagactcccagcaggcagacaaacctgaattgaaggatgaggccgagaagcccagcgag
tctgcagagaaagccgaaaagacggaggccacagaaaaggtgaagaaggagggagcagag
gcagcggaacgggaggaggagagtgaagagcgagtggaggcaaaggcagcggcaccagaa
aaagacaaagatgaggcgatggagacgtcatcttccgaacaggagaaggataaagaggag
aaatcaattccagaggagggagatgagaagaggaagaagttggagcatgacatcggagag
gggaatatcgccaccgcagccgctgcagctctggcgtctgcagctactaaagccaagcac
ttggcagcagttgaggagagaaagattaaatctctggttgctctcctggtggagacgcag
atgaagaagctggagatcaagctgagacactttgaagaacttgagaccattatggatcga
gagaaagaggctttggagcttcagcggcagcagctgctcactgagcgtcaggctttccac
atggagcagctcaaatacgccgagatgaaggcgaggcaacagatggagcagcaagctgct
gccgccgctgcagcagccgcacaggcccaaggacagggccaagcgcccgggtctggaccc
caccctggaccccctccaccaggcatgcaccctggagggcccatgccccaccacggagga
ccgccctcccaccacggaggaccccctccccatcatggagggcccccaccaggcgctgcc
atgcaccctggctacccccccatgggtcatcacccaatggccccccaccacccaggacaa
acagggccgatgggacccggccagcccctccctgggcgaatgatgcccgggcctccctct
gccggccctccacccggtggcatgcctcccatgattcccccccgccaccctggagccccc
aacggcatgtacccaggcccaccacccacgcagcctgaagcgttgcctccggctcctgtg
ggtccaccagtgccccccagtggacgagtagctgacaactaa
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integrated database retrieval system
