Betta splendens (Siamese fighting fish): 114843292
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Entry
114843292 CDS
T08231
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114843292 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bspl03041
]
114843292 (u2af2a)
Spliceosome [BR:
bspl03041
]
Complex A
U2 snRNP components
U2 related factors
114843292 (u2af2a)
Complex B
114843292 (u2af2a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
114843292
NCBI-ProteinID:
XP_028985541
UniProt:
A0A6P7KSW1
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Position
16:12130223..12137078
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AA seq
476 aa
AA seq
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MSDYDEFERQLSENKQAERDKENRHHRRSSSRSRSRDRKRRSRDRDRRSRDRRGDSKDRR
HRRSSPANFPQDNTGSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATAL
LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQA
PGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN
PSVYVPGTQTITGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSA
TGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQ
VPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDDEYEEIVEDVRDECSKYGQVKSIEIPR
PVDGLEVPGTGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacgacgaattcgaacgacagctctctgaaaacaaacaagctgaaagggac
aaagagaaccgccaccaccgccggtcctcctcccgcagccgtagcagagacaggaaaagg
aggagcagagacagagacagacgcagcagggaccgccgtggggacagcaaggatcgcagg
caccggcgcagctctccagcgaacttcccccaggacaatactggaagccgttctcctcac
cgtgagaaaaagaagaaggtgaagaagtactgggatgtccctccacctggttttgaacac
atcactcccatgcagtataaagcaatgcaagctgcaggccagatcccagccacagccctc
ctgccgaccatgactcctgatggactggctgttactcctactcctgtacctgtagtgggg
agccagatgacccgacaggcccgtcgactttatgtgggcaacatcccctttggaataaca
gaggagtctatgatggacttcttcaatgcccagatgcgtttgggtggtcttactcaggcc
cctggaaaccctgttcttgcagtacagataaaccaggataaaaattttgcctttcttgag
tttcgttcagtggatgaaacgacacaggccatggcttttgatggcatcatctttcagggc
caaagtctcaagattcgccgtccccatgattaccagcctctgccgggcatgagtgaaaat
cccagtgtctatgtgcctggtacacagacaataactggtgtggtttccacagtggtacct
gactcagctcacaaactcttcattggtggcttgcccaactatctgaatgatgaccaggtg
aaggagttgttgacatcctttgggccactgaaggccttcaacttggtgaaggacagtgct
acaggcctgtctaagggatatgccttctgtgaatatgttgacgtgaaccttaatgaccag
gctattgctgggctcaatggcatgcagctgggagacaaaaagctcctggtgcagcgagcc
agtgtgggatccaagaacgcaactctgaccagtataaatcagacaccagtgacactgcag
gtgccaggtctgaatagctcagtgactcagatgggaggtctgcccaccgaggtgctgtgt
ctgatgaatatggtggcacccgaggagctgctggatgatgacgaatatgaggaaattgtg
gaggatgtcagagatgagtgcagcaagtacggccaagttaagagcattgagattcccaga
cctgtggacggtctggaagtcccaggcactggcaagatctttgtggagttcacatcagtg
tttgactcccaaaaggccatgcaagggctgacaggaaggaagtttgccaacagggtggtg
gtgaccaaatactgcgatccagatgcttatcaccgccgagacttctggtag
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