Betta splendens (Siamese fighting fish): 114843357
Help
Entry
114843357 CDS
T08231
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114843357 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
114843357 (snx27b)
Membrane trafficking [BR:
bspl04131
]
Protein recycling
Others
Others
114843357 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
114843357 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17-31_F2_FERM
PDZ_2
USP7_C2
SNX17_FERM_C
RA_3
Motif
Other DBs
NCBI-GeneID:
114843357
NCBI-ProteinID:
XP_028985673
UniProt:
A0A6P7KT47
LinkDB
All DBs
Position
16:complement(12907199..12915168)
Genome browser
AA seq
571 aa
AA seq
DB search
MADVEGQGTCSSVPPLPQPSSRRGSSDGAVTPGTGGGCQTPTTVTSGPRLVRIVKSDSGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGERELVLAVLSVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPSYKHI
ELNQEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFANFTFPKLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTVRVRK
NSTTDQVYQAVVMKLGMDSVTSSYFALFEVINHTFVRKLAPNEFPHKLYIQNYTSAIPGT
CLTLRKWLFTTEEEILLNENQLAVSYFFHQAVDDVKKGFIKAEQKSYQLQKLAEQKKMSM
YLSLLRACEGYNEIIFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLENQVISFEWGE
MQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATD
KDNKNCSKDEYFPAAEAQKGWGHLGREIVTS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggacaagggacctgctcgtcggtccctccgctgccccagccttcc
tcccgccgcggctccagcgacggcgccgtcacgccgggcaccggcggcggctgccagacg
ccgaccaccgttacctcgggcccgcggctggtccggatcgtgaagtcggactcgggctac
ggtttcaacgttcgggggcaagttagtgaaggaggccaactgcggagcatcaacggggag
ctgtacgccccgctgcagcacgtcagcgccgtgctgccgggaggagccgcggaccgcgcc
ggtatctcgaagggggaccggatccttgaggtgaacggggtgaacgtagaaggagcgacc
cataagcaggtggtggacctgatccgggccggtgaacgggagctggtgctcgctgtgctc
tctgtcccacctcaggaggccgactgcctcgaccccggagacgacggctcagctcagtcc
tgctacgattactccgacaagcaagcggtccccatctctgtgcccagctacaagcacatt
gagctcaaccaggagaagtttgtggtgtataatgtgtacatggcaggcagacagctttgc
tccaagcgttaccgggagtttgtaatcttacaccaaaaccttaagcgagagtttgctaac
ttcacatttcccaagctgcctggaaagtggcctttttccttgtcagagcagcagctcgac
gcccgacgcagaggcttagaagaatatttagagaaagtctgttctgttcgggtcattggg
gagagtgacataatgcaggagttcctgtcagaatcagacgagaactataatggcgtgtca
gatgtggagctgagaatagccatgcctgacaaaacaacactcacggtcagagttcgcaaa
aactccaccacagaccaggtctaccaggctgtggtcatgaaactcgggatggacagtgta
acatccagttactttgccttgtttgaggtcatcaaccacacttttgtacgcaagcttgcc
cccaatgagtttccccacaaactgtatatacagaactatacctcagccatcccaggaaca
tgcctcaccctgcgcaagtggctcttcaccacagaagaagagattctgctcaatgaaaac
cagcttgcagtcagctactttttccaccaggctgtggatgatgtgaagaaaggcttcatc
aaagcagagcagaagtcttaccagctgcagaagctggcagagcagaagaagatgtccatg
tatctgagtttgttgagggcttgcgagggctataatgagatcatattcccccactgttca
tgtgattcccgacgtaaaggccacgtcatcacggctatcagcatccaccacttcaagctg
cacgcctgcaccgaggaagggactcttgagaaccaggtgatttcgtttgaatggggagag
atgcagaggtgggacacagacgaggagggtatggccttctgctttgaatatgcacgggga
gaaaagaagccgcgctgggtcaagatatttacaccttattttaactacatgcatgaatgc
tttgagagagtcttctgtgagctgaagtggaggaaggaggtggaagaggaggctacagac
aaggacaataagaactgcagtaaagatgaatattttccagctgctgaggcacagaaggga
tgggggcacctaggaagagagattgttacctcttaa
DBGET
integrated database retrieval system
