Betta splendens (Siamese fighting fish): 114843379
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Entry
114843379 CDS
T08231
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114843379 (smg9)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114843379 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_29
AAA_18
MeaB
AAA_30
NB-ARC
Motif
Other DBs
NCBI-GeneID:
114843379
NCBI-ProteinID:
XP_028985712
EnsemblRapid:
ENSBSLG00000017256
UniProt:
A0A6P7KT30
LinkDB
All DBs
Position
16:complement(15217826..15222872)
Genome browser
AA seq
509 aa
AA seq
DB search
MSESGHSQPGLYGQGRRRRRRRGDRDVGAPGQNLSGPSRDRDYQPRERRDGSEDPPGPLI
QKTPIILAKPPGERAKSSQNAPVSGASATEKPIMLMKARDDGGKPGTPPEVAAAQPSSSG
PSKLEKEGQRPTQPVYQIQNRGMGASASSSAVDPMVGQSKLLPPEKMKHSIKLVDDQMNW
CDSAMEYLRDQTDMLVVGVIGLQGSGKSTIMSLLSANTPEEDQRSYVFRAQTQEIKERGG
NQSTGIDFFITQERVIFLDTQPMLSPSILDHLINNDRKLPPEYNLPHTYVEMQSFQIAAF
LFTVCHVVIVVQDWFTDLNIYRFLQTAEMLKPSTPSASHDSTGSSGNDDGAEYYPHIVFL
QNKARQEDFCPRNLKNMHMVVDKLMTHSHLKYKGTLSMVDCNVFPGLGQDYLSPEVNMFL
LPVQESDGEDSLTKAASGTYPLFSLLPGYRGHPSFSTMVSKLRSQILAMPRCQLSHTILT
EKNWFHYAARIWDGVKKSSALSEYSRLLC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccggccacagtcagcccggcttgtacgggcaaggacgcaggaggaggcga
cgccggggagatcgagatgtcggagctcctggtcagaatttgtccggtcccagtcgggat
agggactatcaaccgagagaacgaagggatggaagcgaggacccaccaggtccactcatt
cagaagactcccatcattctagcaaagccccccggagagagggcgaagtcatcacagaat
gctcctgtcagtggagcttcagccacggagaagcctataatgctaatgaaagccagggat
gatggggggaagccaggcacccctccagaggtggcagcagctcagccctctagttctggg
ccttcaaagttagagaaggaaggacagcgacctacccaacccgtgtaccagatccaaaac
cgaggaatgggtgcctcagcgtcaagcagcgctgttgatcccatggttggccaatcgaaa
ctccttcccccagagaagatgaagcatagcataaagctagttgatgatcagatgaactgg
tgtgacagtgccatggagtatctgagggatcagacagatatgttggtggtgggagtcatt
ggccttcagggaagtgggaagtctacaatcatgtctctgttatctgccaacacacctgag
gaagatcaaaggagctatgtatttagagcacagacccaagaaatcaaggaaagaggaggc
aatcaaagtacagggattgacttttttatcacacaggagagagtaatcttcttggacacg
cagccaatgttgagtccttctattctggaccacctcatcaacaacgatcggaagttgcct
ccagagtacaatctccctcacacatacgttgagatgcagtcttttcagattgctgccttc
ctgtttacagtgtgccatgtagtcatagtggttcaagactggttcacagacttaaacatt
tacaggtttcttcaaacagctgagatgctgaaaccttccactccatctgcaagccatgac
agcacgggttcttctggcaatgacgatggagcagagtattatcctcatattgtttttcta
cagaataaggccagacaagaagatttctgcccaaggaacctgaagaacatgcacatggtg
gtggacaagttaatgacccactcacatctcaaatacaaaggtacactgtccatggtagac
tgtaacgtcttccccggcctgggacaggactatctgtcacctgaggtcaacatgtttctc
cttcctgtgcaggagagtgatggcgaggacagtctgacgaaagcagcttcagggacgtat
ccgctcttctccctgctcccgggctacagaggacacccctccttctccaccatggtttca
aaactacgtagccaaattctggccatgccgcgctgtcagctgtcacacaccatccttaca
gagaagaactggttccactatgcagcccgtatctgggatggagtgaaaaagtcctcagct
ctctctgaatacagccgcctcctttgctaa
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