Betta splendens (Siamese fighting fish): 114843408
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Entry
114843408 CDS
T08231
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114843408 (dcaf13)
04121 Ubiquitin system [BR:
bspl04121
]
114843408 (dcaf13)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
90S particles
Other 90S particles
114843408 (dcaf13)
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114843408 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
eIF2A
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
KNTC1_N
Beta-prop_WDR35_TULP_N
MIOS_WD40
ANAPC4_WD40
NBCH_WD40
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
114843408
NCBI-ProteinID:
XP_028985763
UniProt:
A0A6P7KTE6
LinkDB
All DBs
Position
16:20266304..20271882
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AA seq
453 aa
AA seq
DB search
MFFHFIDTMKVKVLSRNPDDFVRETKLDIQRVPRNYDPTLHPFELSREYTRALNATKLER
VFAKPFVASLDGHRDGVNCMAKHTKSLSTLLSGSCDGQVKVWNLTKHECVRTLQAHESFV
RGMVVRYCGTSFFTVGEDKTIKQWKMEAPGYGEEEEPLKTILGKTVFTGVDHHWKDGVFA
TCGQQVDIWDEQRSSPIRSFTWGVDSFSSVRFNPVQTELLGSCASDRSIVLYDMREAAPL
KKVIMTMRTNTLSWNPMEAYYFTCANEDYNLYTYDMRFLDRPIVVHTDHVSAVLDVDYSP
TGQEFVSASFDKTIRIFRKDGSNSREVYHTKRMQHVICVKWSSDSKYILSGSDEMNIRLW
KASASEKLGVLVPRERQAVNYNQKLKEKFQHFPQIRRIARHRHLPKLIYRQTKELNIMKE
ARRRKERNVRKHSKPGSVPPVSEKDKPVVAVVQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcacttcattgatacaatgaaagttaaagtgttgtcaaggaatcctgacgat
ttcgttcgggagaccaagctagatattcagcgcgttcccagaaactacgacccaacactg
catccatttgagctgagcagagagtacactcgggctctgaatgccactaagctggaaagg
gtgtttgctaaacccttcgtggcctcccttgatggacacagagatggggtaaactgcatg
gccaaacacaccaagagcctctccaccctgctctctggctcctgtgatggacaggtgaaa
gtgtggaatctgaccaagcatgaatgtgtgcgcacactccaagcacatgagagttttgtc
cgggggatggttgtccgctattgtggaacttcttttttcacagttggtgaggataaaaca
atcaaacaatggaaaatggaggcgccaggttatggagaggaagaggagccacttaagaca
atcctgggcaagactgtgttcacaggagtagaccatcactggaaggatggtgtgtttgca
acatgtggccagcaggtggacatctgggatgagcagagaagtagcccaattcgttctttc
acatggggtgtagacagcttcagctctgtgcggtttaaccctgtacagaccgaacttctt
gggagctgtgcatcagatagaagtatagtgctgtatgacatgagggaagcagcaccactt
aaaaaggttataatgacaatgagaaccaacacattatcctggaaccccatggaagcctat
tatttcacttgtgctaatgaagactacaatctctacacatatgacatgaggttcctggat
cggccaattgtagtgcatacggaccatgtgtctgcagtgctggatgttgattactctccc
actggacaggagtttgtatctgccagttttgacaagacaattcgtatcttccgcaaggat
ggaagcaacagcagggaggtgtatcacaccaaacgcatgcaacatgtcatctgtgtaaag
tggtcatcagacagcaagtacatcttgagtgggtctgacgaaatgaacattcgactgtgg
aaagccagcgcctctgagaaacttggagtgctggtgcctagagagaggcaggctgtcaac
tacaatcagaagctgaaggagaagttccagcatttcccacaaatccgacgcattgctcgt
catcgccatctacccaagctcatctaccggcagaccaaggagctgaacataatgaaggag
gctcgccgtaggaaggagaggaacgtccgtaaacacagcaaacctggaagcgtccctccg
gtttctgagaaggacaaacctgttgttgctgtggtgcagtaa
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integrated database retrieval system
