Betta splendens (Siamese fighting fish): 114843410
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Entry
114843410 CDS
T08231
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114843410
Cilium and associated proteins [BR:
bspl03037
]
Other cilia and associated proteins
Stereociliary proteins
114843410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
114843410
NCBI-ProteinID:
XP_028985766
UniProt:
A0A6P7KTG9
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Position
16:20259055..20262992
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AA seq
252 aa
AA seq
DB search
MSPLVARLLLLACLVLPLYCVEKVKSRGYRKDPDADKCTGNDAEKLNCTSRSGEERSTYV
YGSCLQGPAGAPGREGNPGTNGIPGTPGIPGRDGSKGEKGECVNEIFEEPWRPNYKQCAW
NSLNYGIDLGKVADCTFTKLRSDSALRVLFSGSLRLKCKSACCQRWYFTFNGAECTGPLP
IESIIYLDQGSPELNSTINIHRTSSVEGLCEGVKAGLVDVAVWVGTCADYPRGDASTGWN
SVSRIIIEELSK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccctcgttgcgcgtctgctgcttctcgcctgcttggttttgccgctttattgc
gtggaaaaggtgaaaagtagaggataccgcaaagatcccgatgctgataagtgcacagga
aatgatgccgaaaagctcaactgcactagtcgctctggggaagaacgatcgacttatgtg
tacggcagctgccttcagggcccagcaggcgcccccggtagagaagggaatccagggacc
aacggcattccagggaccccaggcatccccggccgcgacgggtccaaaggtgagaagggc
gagtgcgtgaacgagatcttcgaggagccctggaggcccaactacaagcagtgcgcgtgg
aactctctgaattacgggatcgacctggggaaagtagcggactgcaccttcaccaagctg
cgctcagacagcgcgctgcgagtgctcttcagcggctccctcaggctcaagtgcaagagc
gcctgctgccagaggtggtacttcaccttcaacggagccgagtgcaccggaccgctgccc
atagagtccatcatctacttagaccaggggagtcctgagctcaactccaccatcaacatc
cacagaacgtcctcagttgaagggctgtgtgaaggcgtcaaagctggcctggtggatgtg
gccgtgtgggtggggacctgcgcagactatcccagaggtgacgcatccacagggtggaat
tcagtctccaggattatcatcgaggaactgtctaagtga
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