Betta splendens (Siamese fighting fish): 114843527
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Entry
114843527 CDS
T08231
Symbol
rorc
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor ROR-alpha B
KO
K08532
RAR-related orphan receptor alpha
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114843527 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bspl03310
]
114843527 (rorc)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114843527 (rorc)
Nuclear receptors [BR:
bspl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
114843527 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TFIIA
DUF2956
Motif
Other DBs
NCBI-GeneID:
114843527
NCBI-ProteinID:
XP_028986002
UniProt:
A0A6P7KU07
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Position
16:complement(13233547..13246952)
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AA seq
516 aa
AA seq
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MEYEEPDAASADGAVKRGGVVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQSNCQIDRASRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLNA
EVEKHRQQQQQHQQQQQQQHQQQQLQGDTHSLLSFPAKARADRSPQLPPALASYAFPGDT
ELLPYGADVHPYLVCSPSDSQVPGMIYRTSGVSHASRSQGRGDNGAHPDIRGFDSHARQP
SHELMAIHSYRALEDPYVFYPHSVRITDELCASIVRSHRDTSQYRVEELPALRWKLFCRE
EIQVYQGKSVDAMWQHCAARLTDAVQYVVEFAKHIPGFRMLSQNDQIALLKTGSMEVVLV
RMSRFFNTENNTVFFDGKFAGAEAFKSLACGDLITAVFDFAHGMCALKLTEQQIAXFSAL
VLINADRPCLEDRGRVQRVQTSVELGLKQILHRDNQDSLMPKLYQRMAVLRSLSSLHMEK
LRWFCQRYPLTAHSLFPPLYKELFASETEAAPGTTH
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagccggacgcggcctctgctgacggcgccgttaaaagaggaggagtt
gtgtccaagaagactcatttaacccagattgaagttatcccatgcaagatctgtggcgat
aagtcctctggcgttcattatggagtcatcacctgcgagggctgcaaggggttcttccgc
cgcagccagctgcccaccgtgtcctactcctgctccaggcagagcaactgtcagatcgac
cgggccagccgcaaccgctgccagcactgccgcctgcagaagtgcttggcccagggcatg
agccgagacgcggtgaagttcggccgcatgtccaagcgtcagcgcgactccctgaacgct
gaagtggagaaacaccggcagcagcagcagcagcatcagcagcagcagcagcagcagcat
cagcagcagcagctccagggcgacacccacagcctgctgtccttccccgccaaggcccgt
gcggaccgctccccccagctgcccccggccctggcctcctacgccttccctggggacacg
gagctgctgccctacggcgccgacgtgcatccctacctcgtgtgctcccccagcgactcc
caggtgccagggatgatctaccgcacctccggtgtctcccatgcatcccgatcccagggg
aggggggacaacggcgcacaccctgacattagagggttcgactctcacgcccgacagccg
tcccacgagctgatggccatccactcctaccgggccctggaggacccctacgtcttctat
ccccactctgtgcggatcacagacgagctgtgcgccagcatcgtgcgctcccacagggac
accagccagtaccgggtggaggagctgcctgcgctgcgctggaagctgttctgcagggag
gagatccaggtctaccagggcaaatcggtggacgcgatgtggcagcactgtgccgctcga
ctgaccgacgccgtgcagtacgtggtggagttcgcgaagcacatcccgggtttccgcatg
ctgagccagaacgaccagatcgctctccttaagacaggctccatggaggtggttctggtc
cggatgagtcgcttcttcaacacagagaacaacaccgtcttcttcgacgggaaatttgct
ggagctgaagcctttaagtctctggcgtgtggtgatttaatcacggccgtgtttgacttc
gctcacggcatgtgcgctctgaagctcaccgagcagcagatcgcgnctttcagcgctctg
gtgctgatcaacgcagaccgcccatgtctggaggacagaggcagggtccagcgggtgcag
accagtgtcgagctgggactcaagcagattctccatcgggacaaccaggacagcctgatg
cccaagctgtaccagaggatggcagtgctgcgctccctgtccagcctgcacatggagaag
ctgcgctggttctgtcagcggtacccgctgacggcccactcgctcttcccgccgctctac
aaggagctgttcgcctcggagacggaggccgcgccggggaccacgcactga
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