Betta splendens (Siamese fighting fish): 114843935
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Entry
114843935 CDS
T08231
Name
(RefSeq) serine/arginine repetitive matrix protein 2-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bspl04121
]
114843935
03036 Chromosome and associated proteins [BR:
bspl03036
]
114843935
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114843935
Enzymes [BR:
bspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114843935
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114843935
UBL E3 ligases
114843935
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
114843935
Cilium and associated proteins [BR:
bspl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114843935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
Baculo_IE-1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
114843935
NCBI-ProteinID:
XP_028986638
UniProt:
A0A6P7KVY0
LinkDB
All DBs
Position
2:complement(28103003..28110160)
Genome browser
AA seq
1604 aa
AA seq
DB search
MAPTRMKLRVRRRDNTAGGAGDGQPARQGERRRESAGRGSRRKNASNTTAEPASAAAAAA
ATSSALPTSSASASVRAVMAAEDASPDSKCPICLDRFNNLAYLDRCLHRFCFPCIQEWSH
NKPECPLCKQPFTSILHSVRAENDFKEYTLRPAPADSNIAATVAMVAAMASRIDHQMRLQ
LRRHRVEDGGEMTTRRHRRERGGGGGSRRAGERSRGLEWYLDSNNLPHIPHHPSVGTDDS
DEAENLAQRPLRREADLAERGVIFEGLTGLGGAVAPLAPNERASRRLITRLAARQRVQRE
GGSVRRLREREMVAFRRALYRCGIRVCGVAGVTGNQGNQQRDITAESFRQNSAHLNRLRP
WLRRELTVLYGAHGVLVHIVQRLIMARLALHGLEDTPTVEEELRPFLLARTDHFLHELVS
FARSPLSLDNYDLQAVYEPPAAALELDGVSSSSESSSVIAISEGEEEEQTRGRSEEGLQG
RSVGAHDIDIQTGSCLSLSAWDDETPGPSYSTAEPSCSLASLSFSPVPQEASHEVGGEKR
EEGEAEEECLIVGYKKPIAERTPELVQLSSDTEEDAEEKKEEKEKVEVEEKPPPLTSTPP
PLSYLPTVPPSTSGAYRDKKADALKDKGGEAEGQPSRGRSWSGSSGRSPGSVFTLSPSER
LQESWKDRKQSGSEAAKERRRRKKRRRGRERSSEWLRRSGTLFNPNRAMYPAMMRRRSPS
PFHSSIDSGSPLPPSPPDSSWDYNCSPLSSSISSSSHSSSSPLSTSPHPSLPPQTPPTPS
LSPRNPCGGEKPGGKRKYKSRHLDSNKEEASRRPSNSLRREKRRKRMEKERRKRRGGDGG
RRRERHQRGSHKEAGGYGGESSSRRLREERSPSVEIIYEGTTTAGGTQPPCKRRKRRPRR
TQHSSSPVIITLDSDSSRDAISNRHAGGGSSSSSPLSSQQTVDFSDLPPLALLHSASAAG
GLEAHVGELPVDILDRGSDGSDTEPVEQPEALVPVDKGGSDHEVDVESVERSSSVLGRKA
AKDDTSNDPREPAGGTGPAGGADRCLLATVLSDLRGISAPQSDVAFGFEPSCSPESRNQR
FRNPCEEPVAPASSNEDPRLAQSKAVSASFPEERQGRGLDLSSCHRSRGKQDPLPPGHAH
LLHLADTGSTVVGSDPTASLHSAEFCRRTRRFPQVPALDRRFGLALRELGSASGAAMERS
SRHVAPAGSHSAAAGAEDLWSSKFRSSTENAHGTRSAPRASSTDSLPVGSGALFHSAGSS
WSSGEPADCDSTSGGQTRSALPSHLHPHTQVPAKDPCAGGGASSGAHSNNTSPLVSLSPT
DARTHDSQTLDEKQSCLASDAGGRTGVSEEHRPPPTTPAPPPIGTAPPPIGTAPPPTGPA
PPPIGTAPAPPPTGTAPAPPPTGTAPAPPPIGTAPPPTTPAPPPIGTAPPPIGTAPPLCA
PAPPPTAPAPPPTAPAPLTAPVLPTPPDRAFSHAAFCSRPPALTMGFHTSPRKCASNVLC
LNESEPKHRNHVGAGSTSRFHSDSYSRTLHIDSQCESQPPTDLRPRNSVKDLGLHTNSCL
SLPQRPVRTQWNSNSTDTHSDSQSPVDERSGSSVWNTLPFRTDD
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atggcacccacgcggatgaaactgcgcgtgcgtcgccgtgacaacacggcaggaggtgca
ggggatggtcagccagcgcgacaaggggagaggcgtcgagaaagtgccggtcgtggcagc
aggcgaaaaaatgccagcaacactacagccgaacctgcttctgctgccgccgctgctgcg
gccacctcctcagctcttcccacttcctctgcatctgcttctgtgcgggcagtgatggcg
gcagaggatgcctcacctgactccaagtgccccatctgcctcgaccgtttcaacaacctg
gcgtacctggaccgctgcctgcaccgcttctgctttccctgcatccaggagtggtcgcat
aacaagcccgaatgtccgctctgcaagcagccctttacctcaatcctgcattccgtgcgt
gctgagaatgacttcaaggagtacacattgaggccggcgcctgccgacagcaacatcgcc
gccactgtggcgatggtcgcggcgatggcatcaaggattgaccatcagatgaggctccag
ttgcgaaggcacagagtggaagatggcggtgagatgaccacaagaaggcacagaagggag
aggggaggaggaggaggaagccggcgagccggggagcggtccaggggactggagtggtac
cttgactctaataatctcccccacattccccaccatccatctgtcgggacagacgatagc
gatgaggcagaaaacctagcgcagcggcctctaaggagagaggcggatctggcggagcgg
ggcgtgatattcgagggactaacagggcttgggggggcagtggcaccgctggcgcccaat
gaacgggcgtcacggcgcttgataacgcgtctagcagcaaggcagcgggtgcagcgagaa
ggtggatccgtgcggcgtctgagggagagagagatggtggccttccgtcgcgccctttac
cgctgtgggatacgggtttgtggtgtcgctggggtcactggtaaccagggtaaccagcag
cgtgacatcaccgcggagagcttccgtcagaattctgctcacctgaacagactccgccca
tggttgcgcagagagttgacagtactgtatggagcacatggagtgctggtccacattgtc
cagcgcctcatcatggcacggcttgccctccacgggctggaggacacgcctacagtagaa
gaagagctacgacctttcctattggctcgcactgaccattttctgcatgagctggtaagc
tttgcccgctcccccctcagcctggacaactacgacctgcaggcggtgtatgagccgcca
gctgctgctctggagctggacggagtaagcagctcgtctgaaagcagctctgtcattgcc
atttctgagggtgaggaagaggagcagacgagaggaaggtcagaggagggtctgcagggg
cgatctgtgggggcacatgacatcgacatccagacgggaagctgtctcagcctatcagcc
tgggacgatgagactccaggcccgtcctactccaccgctgaaccgtcgtgttccttggcg
tcactgtcatttagtcccgtccctcaagaagcctcccatgaggtggggggagagaagcgg
gaggagggggaggcagaggaggagtgtctgattgttggctacaaaaagccaatagctgag
cgaaccccagagctggtgcagctgtcctctgacacggaggaggatgcagaggagaagaaa
gaagagaaggagaaggtggaggtggaggagaaaccccctcccctcacctccacgcctcct
cccctctcttaccttcccacggtcccaccctccacatcaggcgcatacagagacaaaaag
gcagacgcactgaaggacaaaggcggtgaagccgaagggcagccctcgcgtggccgctca
tggtccggcagctcagggaggagccccgggtccgtgttcacgctgagtccaagcgaacgg
ctgcaggaaagctggaaagaccgaaagcagtcaggcagcgaggcagcgaaagagaggagg
aggcgcaagaagaggaggagaggaagggaaaggagcagcgagtggctgagaaggagcggc
accctgttcaaccccaaccgcgccatgtatccagccatgatgcgtcggcgttcaccctca
ccctttcactccagcatcgattctggctcaccactgcctcccagcccgcccgactccagc
tgggactacaactgctcccccctctcctcctctatctcctcatcatcccactcctcctcc
tcacccctgtctacctctcctcacccttcgctgccaccacagacgccgccgacgccctcg
ctgtcccccagaaatccttgtggtggtgaaaaacccggggggaagaggaagtacaagagc
cggcatttagacagcaacaaggaggaggccagcaggaggccaagcaacagcctgcgaagg
gagaagagaaggaagaggatggagaaggagaggaggaagaggagggggggagatggaggg
aggagaagggaaaggcaccagaggggcagtcataaggaggcgggaggatacggtggagag
agcagcagcagaaggttgagggaggagcgcagtcccagtgtggagattatctacgagggc
accaccaccgctggagggacacaacctccctgcaaacgccgcaaaaggcgcccccgcagg
acgcagcacagcagttctccagtcatcatcactctggacagcgacagcagccgtgacgcc
atcagcaaccggcacgctggcggcggcagcagcagcagcagcccactcagcagccagcag
acggtggacttctctgacctcccccccctcgccctgctgcattctgccagcgctgccggg
ggcctggaagcacacgttggtgagcttccagttgacatcctggaccgaggatctgacggg
tccgataccgaaccggtggaacaacctgaggctctggtcccggtcgacaaggggggcagt
gaccatgaagtggacgtggaaagtgtggaaaggagcagctctgtgctgggacgtaaagct
gcaaaggacgacaccagtaatgaccctagagaaccagcaggtggcactggtccagcagga
ggtgctgacagatgcctgctggccacagtcctcagtgacctgagggggatctctgctcct
cagagcgacgtggcctttggctttgagcccagctgttcacctgaaagcagaaaccagcgc
ttcaggaacccatgcgaggaacccgtcgctccggcctcttccaacgaggacccacgtttg
gctcagagcaaagctgtcagtgcatcttttcctgaggagcgtcagggtcggggcttggac
ttgtcctcatgtcatcggtcccgtgggaaacaggacccccttcctccaggtcacgcccac
ttacttcacctcgctgacaccggctccacagttgtgggttcagatcccactgccagtctg
cactcggctgagttctgcagaagaacccggaggttccctcaggttccagcgctggacagg
cgcttcggcctggcgctacgggagctgggctctgccagcggtgcagccatggagcggtcc
tcccgtcacgtagcacccgctggctcccattcagcggctgcaggcgctgaggacctctgg
tcctcaaagttccgttccagcacagagaacgcacacggaacgcgttctgctcccagagcg
tcgtccacagactcgcttcctgtgggttcaggggctctgttccactcagcagggagcagc
tggtcctcaggagaacccgctgactgtgactctacctctggaggccagacccgcagcgcg
ctgccctcccacctccacccccacacgcaggttcctgctaaagacccgtgcgccggtggg
ggcgcttcatcaggagcccactctaacaacacgtcacccctcgtttcactctcacccact
gacgccagaactcacgactcccagacgttagatgaaaagcagagctgcttggcctcggac
gcaggcggccggacaggagtcagtgaggagcacagacctcctcccaccacccccgcgcct
cctcccatcggcaccgcgcctcctcccatcggcaccgcgcctcctcccaccggccccgcg
cctcctcccatcggcaccgcccccgcgcctcctcccaccggcaccgcccccgcgcctcct
cccaccggcaccgcccccgcgcctcctcccatcggcaccgcgcctcctcccaccaccccc
gcgcctcctcccatcggcaccgcgcctcctcccatcggcaccgcgcctcctctctgcgcc
cccgcgcctcctcccaccgcccccgcgcctcctcccaccgcccccgctccgctcactgct
ccagtcctccccaccccccctgacagagccttcagccacgcggccttctgctcccgtccc
cctgctctcaccatgggcttccacacatcaccgaggaagtgcgcttccaacgtcctctgc
ctgaatgagtccgagcctaaacatcggaaccacgttggtgccggctccacgtcccggttc
cactctgactcctactcgcgtacgctgcacattgactcccagtgtgagtctcagccgccc
actgacctacgtcccaggaactctgtgaaagacctcgggctccacacaaacagctgcttg
tcgcttccccagcgccccgtcaggacccagtggaactccaactccaccgacacccactca
gactcgcagtcgcccgttgacgagcgctcaggcagcagtgtctggaacacgctgccgttc
aggaccgacgactga
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integrated database retrieval system
