Betta splendens (Siamese fighting fish): 114844223
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Entry
114844223 CDS
T08231
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114844223 (helz)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
114844223 (helz)
3'-5' decay
Other 3'-5' decay factors
114844223 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
UvrD-helicase
ResIII
PAM2
zf_CCCH_4
AAA_22
AAA_16
zf-CCCH_4
AAA_5
TPR_1
Motif
Other DBs
NCBI-GeneID:
114844223
NCBI-ProteinID:
XP_055364150
UniProt:
A0A9W2XR28
LinkDB
All DBs
Position
1:complement(11945740..11984912)
Genome browser
AA seq
2094 aa
AA seq
DB search
MADRRAEKSCEEASRSLARREYEVAVTHSTDALVFLAPQAPSSGAPVPPSPTSLIAAGSL
RSRALLYRIAAFLQLKNYDEADEDCKHVLAGEIARGDGSLQASLRSMLLDGSLQEVASIL
SKALYGEPMNGIITKDLTRLKMLLSEIEAINREMAPPEYTDDQEEEVQDGWQFRPPPRGV
TSSEEYTLCKRYLEQGLCRYGAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENY
METLIEKWMNSLSPEKVLSDCLDGVNVDTSSSLSVTVTTKKSSHSWTFSLLCKPARKLNR
VALLYDAHRPHFFITGVSDGERLQAVPKGCQEWTPGEETALPADNGLDHCIYKVAVGFST
EIFGTFRQTVVFDFGSEPVLMQRIMVDAASIEDLEHLMAARQQLLMTAKRWDSSCKTIVE
FSPNEMADLERSLLSRYQIPLSADQLFTQSVLDKTLTKDNYQARLHDLLYIEEIAQYKEV
SKFNIKVNLQLVTSFMLTGISVGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSVL
LLPLGREGFISQPPPGVKERVYEAVIEEKTKEYIFLRICKDCCDELGLQPDRELQVELQF
QLNRLPLCEMHYALDRIRENTILFPDISLVPTIPWSPNRQWDEQLDPRLNAKQKEAILAI
TTPISVPLPPVLIIGPYGTGKTFTLAQAVKHILRQEHSRVLICTHSNSAADLYIKDYLHP
YVEAGNPHARPLRVYFRNRWVKTVHPVVQQYCLISNTQVTFQMPSREDVLRHRVVVVTLS
TSQYLCQLDLEPGLFTHILLDEAAQAMECETIMPFALASKTTRVVLAGDHMQLSPFVYSE
FARERNLHVSLLDRLYEHYPPEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPS
HKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEELRKKWPVAWGKLDEGSIGVV
SPYADQVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRYTCKHKQTAIKRKE
QLVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWEHFISICHE
NSSLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRPLQGLHSSSQPLHPHHHVHP
QHVQPALNKQGPQQPQQQQQSPPKGKHANHTDHLPPEGYIQPNPAVLMGNPIRAYTPPLA
GTPAGIGKSPSPVQRIDPHTGTSILYVPAVYGGNMVMPVPLHLPWPGYQNRFAVDPRIMS
HPAAMAYNFNLLQAQNRGSPLPYSAVAHPSPLGMSQPSPDKELQADTIRNGKLEACPKSE
QNRLQTPERKTTDMKEKQGDLDTGQSRNLDSQLDGLVGYPNALLHRKDPSASHRPLNYHL
APPNPAFPPASGRAFPPQYPVSRLPYRVGQPQHPGMAQQNPQQQQQQQQQQQQQLSPAYT
GGSHNASFFNGPMPAHRALQSPTLDGPDSGGVEEMSSSIRPPMGHPGGHHPGLSQHNRVN
SFGEDGQDGGLGDGLDLQGPLALEALSQQQAARLGQWGEAAGPFLQGSVAFPMPQQLAHL
AQPSMARFPHQLLRAASWGFSANMEDDTVSSASSGPVFNRYPGLLREMPPQEQTEPREAA
EMQPPPQSRLLQYRQSRASGDPSSSLGAASNHVGPFPSGPYSHDIGRDVLNDNPLNKPAL
QQQHHPGNSMFNTGSYPQQPPAHSASPPPAQVKYLLQDAQWSHSGAASVSPPQQNHPLGN
QGHGLPYGLPIMAHPSRPEQVHLMQLHHQHQQQQQQHHHHHQHQQQSRGQEQESYHPLSP
RTSAAAALHNVDEYEPRGPGRPLYQRRISTGYPDEPSPANAHNSLSQQSQPCTSEHQDHP
HPHMQHHQQPQPSYIYPSPDPWPSNGAGPSPFQNIPCNGAGTLAQHRDLMASKAVRQTSE
QVKAEATAVQQAHPHALNSFQHLGQFPPLLPSNKQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQPQQQQQQQQQQPQQQQQQQQQQPQQQQQAPPQTPTEPNQGGANLS
KPPTMSYASALRAPPKPRAVRPEQVKKNSDPISLLQELSIGSSNGSSGYYSYFK
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaggagagcggagaagtcatgtgaagaagccagcagatcgttagccaggcgg
gagtatgaggtggcagtcacccacagtacggacgcccttgtgttccttgcaccacaagcc
ccatcctctggtgcccctgtcccaccgagccccacgtcccttattgccgccgggtccctg
cgcagccgtgcactgctctacagaatcgctgccttcctgcagctgaaaaactatgatgaa
gctgatgaagactgcaaacatgtcctggcaggagagattgccaggggagacggttcgcta
caggccagcttgcgctccatgctgttggatggcagcttgcaggaggtggccagcatcctc
tctaaagccttatatggagaaccaatgaatggtattatcacaaaggacctgactagattg
aaaatgcttctctcagaaatagaggctataaatagggagatggcaccaccagaatacacc
gatgaccaggaggaagaggtccaagatggctggcagttccggcctcctccccgaggagtc
accagcagtgaggagtataccctctgtaaaaggtacttggagcagggtctgtgtcggtat
ggggctcagtgtacatcagcccactcccaggaggaacttatggagtggcaaaagcgctat
gcgtcacgcctcatccgcctcaaacagcagcaggagagcaagcacttcactgaaaactac
atggagaccctgatagagaaatggatgaactccctgtccccagagaaagtgctgagtgac
tgtttagatggagtaaatgttgataccagctccagcctctctgttaccgttaccaccaaa
aaatcctcccactcctggaccttttcattgttgtgcaagcctgctagaaaactgaatcgc
gttgccttgctctatgatgcgcaccgaccacacttcttcatcacaggtgtatcagatggg
gagcggctccaagccgtacccaaaggctgccaagagtggactccaggagaagaaacagca
ttaccagcagacaatggccttgaccactgtatctacaaggtggctgtgggcttcagcaca
gagatctttggtacctttcgacagactgtagtttttgactttggttcagaacctgtgctg
atgcagcgaatcatggtggatgctgcctctattgaagacctggaacacctaatggcagcc
aggcagcagcttttgatgactgcaaaacgctgggactcttcatgtaagaccattgtagaa
tttagtcctaatgagatggctgatctggagcgcagccttctttcgcggtatcagatccct
ttgtctgctgaccagctcttcacccagtcagtcctggacaagactctgaccaaagacaat
taccaggcccgactgcatgacctgctttacatagaggaaattgcacaatataaggaagtt
agcaagtttaacatcaaagtcaacctccagctagtcactagcttcatgctcactggcatc
tctgttggagccaagtatgcccaaaatgggcagctctttgcacgttttaaactcactgaa
acactgtctgaggacacattggctgggaggctagtgatgaccaaggtgaattcagtcctg
ctgcttccattgggccgtgaagggttcatcagtcagccacctcctggagtcaaagagcgt
gtttatgaggctgtgattgaggagaagaccaaggagtacatttttctaaggatctgcaaa
gactgctgtgacgagttggggctccaacctgacagagaattacaggtggagcttcagttc
cagctcaacagactgccactctgtgagatgcactatgccctggatcgcatcagagagaat
accatccttttcccagacattagccttgttcctaccatcccatggagccccaacaggcag
tgggatgagcagctggatcctcgtctgaatgcaaagcagaaagaggctatcctggccatc
accacacccatctctgtccccctgcccccagtcctgatcattgggccctatggcacaggc
aagacattcaccctggcacaggctgtcaagcacatccttcgccaagaacacagcagggtc
ctgatctgcacccattcaaacagtgctgctgatctttacattaaggactaccttcaccct
tacgttgaagcaggcaatccgcacgccagacctctcagggtatacttccggaaccgctgg
gtgaagacagtccacccagtagtccagcagtactgtctcatctccaacacgcaggtcact
ttccaaatgccctcgagggaggacgtcctcaggcaccgtgtggtggtggtcaccctcagc
acctcccagtacctctgccagcttgacttggagcctggtttgttcactcatatcctgttg
gatgaagcggctcaggccatggagtgtgaaaccatcatgccttttgctctagctagcaag
accacccgtgttgtgctggctggagaccatatgcagctcagtccatttgtgtatagcgag
tttgcacgggagcgtaacctgcatgtgtcgctgctggaccgactgtatgagcactaccct
cctgagttcccctgtcgcatcctcctctgtgagaactaccgctctcatgaagctatcatc
aactacacatcagagttattttatgaaggaaagctaatggcaagtggaaaacagccttcc
cataaggacttttatcctctgacgttcttcacagcaagaggagaagacgtgcaggagaag
aacagcactgcctattacaacaatgctgaggtctttgagattgttgagcgggttgaggag
ttgcgtaaaaagtggccagtggcctggggtaagttggacgagggcagcatcggagtggtg
tcaccgtatgctgaccaggtgtttcgcattcgtgctgagcttcgtaagaagagaatgcat
gaggtcagcgtggaaagagtgcttaatgttcaaggtaaacagttccgggtgctgtttctc
agcacggtaaggacgcggtacacttgcaagcacaagcaaacggccatcaagcgcaaagag
cagctagtcgaggactcaacagaggacctcgactatggtttcctctccaactacaagctc
ctcaatactgccataaccagagcacaatcactggttgcagttgtaggagaccccatagca
ctgtgctctgttgggcgatgcagaaaattctgggagcactttatctccatctgccatgaa
aactcaagccttcacggcatcacctttgagcagatcaaggcacagctggaggccctggag
ctcaagaagacctacgtcctcaacccactggctccagaattcatccctcgagccctcagg
cccctacaggggcttcactcttcctcacagcccctccaccctcaccatcatgtgcatcct
cagcacgtgcagcctgcgttgaacaagcaaggcccacaacagccccagcagcaacagcag
tcaccgcccaaggggaaacatgcaaaccacacagatcatcttccacctgaaggatacatc
caaccaaacccagctgtgctgatgggaaacccgattcgggcatatacaccaccactggct
gggacacctgctggtataggcaagtctcccagtcctgtgcagaggatagatcctcataca
ggcaccagtatcctctatgtgccagctgtgtatggtggaaacatggtgatgcccgtgccc
ctacatttaccatggccaggttaccagaacaggtttgctgtggaccctcgcatcatgagc
cacccagcagccatggcctacaactttaatctgctgcaggcccagaaccgaggctccccc
ctcccttacagtgccgttgcccatccctctcccctaggcatgagtcagccaagcccagac
aaggaactacaggcagacactataagaaacgggaaattagaagcatgtccaaagtcagaa
cagaaccgtcttcagacaccagagagaaaaacaacagacatgaaggaaaaacagggagat
ttagacacaggccaaagtcgaaatctagactcacaactggatggccttgttggatatccc
aatgcgctgcttcatcgaaaagacccctcagcttcgcacagacctctcaactaccacctt
gcgccacccaacccagcatttccacctgccagtggaagagccttccctccacagtatccc
gtctccaggcttccttatcgagttggtcagcctcagcacccagggatggcccaacagaat
cctcagcagcagcagcagcagcagcagcagcagcagcaacagctcagtcctgcttacact
ggtggcagccataatgcttccttctttaatggtcccatgccagctcacagggctctccag
tctcctactttggacggaccagattctggaggggtggaagagatgagcagttctattagg
cccccaatgggccatccaggaggtcaccaccctggcctgtcacagcacaacagggtcaac
agctttggggaggatggacaggatggaggcttgggagatggtttggacctccaaggtccc
ttggctctagaggccctaagccagcagcaggcagccaggctgggtcagtggggtgaggca
gcaggccctttccttcaaggcagtgttgcttttcctatgccccaacagcttgcccacctt
gctcagcccagtatggctcgatttcctcatcagctgctccgcgcagccagttggggcttt
agtgccaatatggaggacgatactgtttcttctgcctcttctggtccagttttcaacagg
tatcctggcctcctaagggaaatgcctcctcaagaacaaactgaacccagggaagcagct
gagatgcagcctcctcctcagtctcgtctcctccagtatcgccagtctcgtgcctcaggt
gacccttcatcatctttaggtgccgcctccaatcatgttgggccttttccatcaggacct
tactcgcatgacatcggtcgcgacgtccttaacgacaaccctcttaacaaaccagctctg
caacagcaacatcacccggggaactccatgttcaacactggtagctacccacagcagcca
ccagctcactctgccagtcccccacccgcccaggtcaagtaccttctgcaggatgctcag
tggtcccacagtggagctgcatctgtgagcccgccacaacagaaccacccgttagggaac
cagggtcacggcttaccttatggactgcccatcatggctcaccctagcaggccagagcaa
gttcacctgatgcagcttcaccatcagcaccagcagcagcagcagcagcatcaccaccac
caccaacatcaacaacaaagtcgaggtcaagaacaagagtcctaccatccactgtccccc
agaacatcagcagctgcagcccttcacaacgtagatgagtatgaacccagaggtccaggt
cggcctctttatcagcgccgcatctccacaggctatccagatgaaccatctccagccaac
gcccacaattctctctcccagcagtcacagccctgtacatcagaacaccaggaccacccc
catccacacatgcagcatcatcaacagccacagccctcttatatttatccctcacctgac
ccctggcctagtaatggtgcaggtcccagcccgttccaaaacattccatgtaatggagct
ggcacacttgcgcagcaccgggaccttatggcttccaaggccgttcggcagacaagtgag
caggttaaggctgaggccacagcagtacagcaggcgcacccacacgctctgaattccttt
cagcaccttggacagtttcctcctctcctgcccagcaacaagcagcagcaacaacaacaa
caacaacaacaacagcagcagcaacaacaacagcagcagcaacaacaacagcagcagcag
caacaacagcagcagcagcagcaacaacagcagcagcagcaacaaccgcagcagcaacaa
caacagcagcagcaacaaccgcagcagcaacaacaacagcagcagcaacaaccgcagcag
caacagcaggcaccgccgcagactcccacagagcccaaccaagggggtgcaaatttaagc
aaaccaccgaccatgtcctatgcgagcgccctccgtgccccacccaagcccagagctgtt
cgtccagaacaggtcaaaaagaacagcgaccccatctccctcctccaagagctgagtata
ggaagttcaaatggtagcagtgggtactattcctacttcaaatga
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integrated database retrieval system
