Betta splendens (Siamese fighting fish): 114844247
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Entry
114844247 CDS
T08231
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03030
DNA replication
bspl03410
Base excision repair
bspl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114844247 (zgc:110269)
03410 Base excision repair
114844247 (zgc:110269)
03450 Non-homologous end-joining
114844247 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bspl03032
]
114844247 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114844247 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bspl04147
]
114844247 (zgc:110269)
DNA replication proteins [BR:
bspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
114844247 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
114844247 (zgc:110269)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
114844247 (zgc:110269)
Exosome [BR:
bspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114844247 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
114844247
NCBI-ProteinID:
XP_028987290
UniProt:
A0A6P7L086
LinkDB
All DBs
Position
17:7130316..7133957
Genome browser
AA seq
341 aa
AA seq
DB search
MGIMKLADLIRSDAPDAVCHKQIQDYSGKVIALDASIVLNQFRAVTPKLSPLKGLVYRIL
TFLENGIKPVFVFDGKPPKEKSAVLKKRAKSKGFSNSTGTASSKTKDCIKLLSLLGVPVI
QAPGDAEALCARLVREGSVDAVASEDMDTLPFGGTVLIRQLNAKKDSDITEYTLSKLLSK
LDMTREQFVDLCILLGCDYCQKIKGLGPKKALKLIQKHHTIEGVVSHIKRQTYPVPQLWN
YREARKIFLDAPQIEAPQLSWSEPDEEALVEFLCPRPFAEDKLRNRMKTYRARREKQERE
KAAGYTRQSKITDFTRVTRKRQKAMKTTESPGIEKKRAKSK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcatgaaactggcagatctgatccgctcggacgctccggatgccgtttgtcac
aaacaaatccaagactattcaggtaaagtcattgcactggatgcctcgatcgtgctgaac
cagttccgggctgtgactcctaaactaagtcctctgaagggtctcgtctaccgcattctc
actttcctggaaaatggcataaagccagtgtttgtgtttgatggaaagcctcctaaagaa
aagtcagctgttcttaagaagcgagcaaagtcaaaaggcttctccaacagtactggcaca
gcttcttcaaagaccaaagactgcataaaactcctgagtctcttgggtgtacctgtcata
caggctccaggcgacgctgaggcactgtgtgctcgacttgtgagagaggggagcgtggat
gcagtggcgtcagaggacatggacacactgccgtttggcggcactgttcttattcgccag
ctgaatgccaagaaggacagcgatataactgaatatactttgtccaaactattatctaaa
ctggatatgactcgtgaacagtttgttgacctgtgcattttgttgggctgtgattactgt
caaaagataaaaggactgggcccaaaaaaagcactgaagctgatccagaagcaccacacg
attgagggtgtggtttcgcatatcaaaagacagacttatcctgtgccacagttgtggaac
tacagagaagcacggaagatattcttggatgcaccacaaattgaggctccccaactcagc
tggtctgagccagatgaagaagccttggttgaattcctctgtcccagaccatttgctgaa
gacaaacttcgcaatcgaatgaagacttaccgtgcgaggcgggagaagcaggaaagggaa
aaagcagcaggatataccaggcaaagtaaaattacggactttaccagagtcacaagaaaa
aggcagaaggccatgaagactacagaatctccaggcatcgagaaaaagagggcaaagtct
aaatag
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