KEGG   Betta splendens (Siamese fighting fish): 114844262
Entry
114844262         CDS       T08231                                 
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
bspl  Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:bspl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bspl04131]
    114844262
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bspl04147]
    114844262
Membrane trafficking [BR:bspl04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    114844262
Exosome [BR:bspl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   114844262
  Exosomal proteins of bladder cancer cells
   114844262
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 114844262
NCBI-ProteinID: XP_028987314
UniProt: A0A6P7L2J0
LinkDB
Position
17:12307891..12317392
AA seq 1222 aa
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD
VRGITGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGSWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDL
EKETVPEVDPNAQLLQPPPPVNPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADLDMDTS
GGEGWGDDAELQLDDDGFMDAQEGLGDEGVAKDEGGGWEVEEDLDLPPELDIPAGAAGGA
EDGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVNFGPYKSLFMQT
LSRGRTCYLALPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLISRLQQCYQLTTSGRF
EEAVERFRAILLSIPLLVVDNKQEIAEAQQLITICKEYIVGLSMETERKKLPKDTLEQQK
RLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR
KILAACEKTLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPTYKGQICR
VTQVTEIGKDVIGLRVSPLQFR
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgctaaccaaatttgaaacgaagtcggctcgtgttaaaggcctgagtttccaccctaaa
cggccatgggttcttgcaagtttgcacaacggagtcatccagctgtgggactatcggatg
tgcacgctgattgacaagtttgacgagcatgatggtcccgtcagaggaattgattttcat
aagcagcagcctctgtttgtgtctggaggagacgactacaaaataaaggtgtggaactac
aagctaagacgctgcctcttcactctcctagggcacctagattacataagaaccaccttc
tttcaccatgagtacccatggattctcagtgcgtcagatgaccagaccattcgtatctgg
aactggcagtctagaacctgtgtctgtgtgctgactggacataatcactatgtgatgtgt
gcccagttccatccttctgaggacttggtggtgtcagccagtctggaccagactgtgcga
gtatgggatatctctggtctgaggaagaagaacctgtctccgggcgctgtggagactgat
gtgcgtggcatcacaggtgttgacttgtttggtgcctctgacgctgtagtcaaacatgtc
cttgagggtcacgaccgaggggtcaactgggcggccttccaccccagcatgcccctcatc
gtgtctggagctgatgacagacaggtcaagatctggagaatgaatgagtccaaagcatgg
gagctggatacctgccgtggtcactacaacaacgtgtcctgtgccgtcttccacccaagg
caggagctcatcctgtccaactctgaggacaagagtatccgagtgtgggatatgtccaaa
aggaccggtgtgcagaccttccgccgtgaccatgatcgcttttgggttctgggggctcac
ccaaacctcaacctctttgctgctggtcatgatagcggcatgattgtgttcaagctggag
cgtgagcgcccggcatacgccgtacatggaaacatgctgtactacgttaaggatcgtttc
ctccgtcagttggacttcaacagcagcaaggacactgctgtcatgcagctgcgcagtggg
tctaaattcccagtgttcagcatgtcttacaaccctgctgagaatgctgtcctgctctgc
actagggccacaaacctggagaacagcacctacgatctgtactcgattcccaaagaaagt
gattctcagaaccctgatgcaccagaagggaaaaggtcttctggtctgacagcggtctgg
gtggccaggaacagatttgctgtcctggaccgaatgcactctcttctgatcaagaaccta
aagaatgaaattgtgaagaaagttcaggtgccgagctgtgaggaaatcttctacgccggg
acaggctccctgctgctgcgcgatgctgacggcgtcacgctgtttgatgtgcaacagaaa
cgctctttggcaaccgtcaagattgccaaggtcaagtatgtggtgtggagtgcagacact
agccacgtggctctgctggctaaacacgccattatgatctgcaaccgcaaactggagagc
ctgtgcaacattcacgaaaacatcagagtaaagagtggatcctgggacgagagtggtgtc
ttcatctataccacttccaaccacatcaaatacgctctgacctccggtgatcatggcatc
atcaggaccttggatctgcctatctatgtgacccgagtgagaggaaatagtgtctactgc
ttggacagagagtgcaggccccgcgtcctcaccattgaccccacagagtaccgcttcaaa
ctggccctggtgaaccgtaaatatgatgaggtacttcacatggtgcgtaatgccaagcta
gttggccagtccatcattgcctacctgcagaagaagggctaccctgaggtggcgctgcac
ttcgtcaaggatgagaagactcgctttagcctggctctggagtgcggcaacattgaggtg
gcactggaggcagcaaaggccctggatgagcgcagctgctgggagcgtcttggtgaggca
gcactgctgcagggtcaccaccaggttgtggaaatgtgctaccagaggaccaagaacttt
gacaagctcaccttcctttacctcatcacgggcaacctggccaaacttcgcaagatgatg
aagatcgctgagatcaggaaggacatgagcggtcactaccaggcagccctctacctggga
gacgtcagcgagagggttcgcatcttaaagaactgtggacaaaagtctctggcttacctg
actgcagccacacatggtctggatgaggaagctgaggcactgaaggagacctttgacttg
gaaaaggagacggtgccagaggttgatcctaatgcacagctgctgcagcccccaccacca
gttaaccctctggacaccaactggcctctgctcactgtatcaaagggcttctttgaggga
gccattgcagcaaaggggaaggcaggtcaaatggctgcagacctggacatggatacttca
gggggagagggctggggagacgatgcagagcttcagctggatgatgatggcttcatggat
gcccaggaaggattaggagatgaaggagtagcaaaggatgagggaggtggctgggaggtg
gaggaagacctggaccttcctccagagctggacattccggctggtgcagctggaggagca
gaggacggcttcttcgtcccaccaacaaagggaatgagtccaactcagatgtggtgcaac
aactcgcagttgcctgtggaccacatcctggctggctcatttgaaactgctatgagactg
ctccatgaccaggtgggagttgtgaactttggcccctacaagtcgctcttcatgcagaca
ctgtccagggggcgcacgtgttacctggcgctgccttcgctgccctgcctgcgcggccat
ccccagaggaactggaaggactgtggtgcgaagcagggactgcccgcagtgggtctgcgt
ctctccgacctcatttcccgcttgcagcagtgctaccagctgaccacttctgggcgtttt
gaagaggctgtggagcgcttcagagccatcctgctgtctatacctctgctggtggttgat
aacaagcaggaaattgcagaggcccaacagctgatcacaatttgcaaagagtacatagtg
ggcctgagcatggagactgagagaaagaagttgcctaaagacacgttggaacagcagaag
aggctgtgtgagatggctgcttacttcactcactgtaatctccagcccgttcacatggtg
ctggtgttgcgcacagctctgaacctcttcttcaaactgcgtaacttcaagaccgctgct
ggctttgcacgacgcctgcttgagctggggccaaagccagatgttgcacagcagacccgc
aagattttggcagcttgtgagaagaccttgacagatgcccaccaactgaactacgacccc
cacaatccattcgatctgtgcgctgcctcttttgtccctctgtaccgtggacgccctgta
gagaagtgccctctgtctggagcctgctactgtcctacgtacaaaggccagatctgcagg
gtcacccaggtaacagagatcggtaaggatgttatcggtctgcgtgtgagtcctcttcag
ttccgttaa

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