Betta splendens (Siamese fighting fish): 114844262
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Entry
114844262 CDS
T08231
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114844262
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bspl04147
]
114844262
Membrane trafficking [BR:
bspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
114844262
Exosome [BR:
bspl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114844262
Exosomal proteins of bladder cancer cells
114844262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
114844262
NCBI-ProteinID:
XP_028987314
UniProt:
A0A6P7L2J0
LinkDB
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Position
17:12307891..12317392
Genome browser
AA seq
1222 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD
VRGITGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGSWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDL
EKETVPEVDPNAQLLQPPPPVNPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADLDMDTS
GGEGWGDDAELQLDDDGFMDAQEGLGDEGVAKDEGGGWEVEEDLDLPPELDIPAGAAGGA
EDGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVNFGPYKSLFMQT
LSRGRTCYLALPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLISRLQQCYQLTTSGRF
EEAVERFRAILLSIPLLVVDNKQEIAEAQQLITICKEYIVGLSMETERKKLPKDTLEQQK
RLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR
KILAACEKTLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPTYKGQICR
VTQVTEIGKDVIGLRVSPLQFR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaatttgaaacgaagtcggctcgtgttaaaggcctgagtttccaccctaaa
cggccatgggttcttgcaagtttgcacaacggagtcatccagctgtgggactatcggatg
tgcacgctgattgacaagtttgacgagcatgatggtcccgtcagaggaattgattttcat
aagcagcagcctctgtttgtgtctggaggagacgactacaaaataaaggtgtggaactac
aagctaagacgctgcctcttcactctcctagggcacctagattacataagaaccaccttc
tttcaccatgagtacccatggattctcagtgcgtcagatgaccagaccattcgtatctgg
aactggcagtctagaacctgtgtctgtgtgctgactggacataatcactatgtgatgtgt
gcccagttccatccttctgaggacttggtggtgtcagccagtctggaccagactgtgcga
gtatgggatatctctggtctgaggaagaagaacctgtctccgggcgctgtggagactgat
gtgcgtggcatcacaggtgttgacttgtttggtgcctctgacgctgtagtcaaacatgtc
cttgagggtcacgaccgaggggtcaactgggcggccttccaccccagcatgcccctcatc
gtgtctggagctgatgacagacaggtcaagatctggagaatgaatgagtccaaagcatgg
gagctggatacctgccgtggtcactacaacaacgtgtcctgtgccgtcttccacccaagg
caggagctcatcctgtccaactctgaggacaagagtatccgagtgtgggatatgtccaaa
aggaccggtgtgcagaccttccgccgtgaccatgatcgcttttgggttctgggggctcac
ccaaacctcaacctctttgctgctggtcatgatagcggcatgattgtgttcaagctggag
cgtgagcgcccggcatacgccgtacatggaaacatgctgtactacgttaaggatcgtttc
ctccgtcagttggacttcaacagcagcaaggacactgctgtcatgcagctgcgcagtggg
tctaaattcccagtgttcagcatgtcttacaaccctgctgagaatgctgtcctgctctgc
actagggccacaaacctggagaacagcacctacgatctgtactcgattcccaaagaaagt
gattctcagaaccctgatgcaccagaagggaaaaggtcttctggtctgacagcggtctgg
gtggccaggaacagatttgctgtcctggaccgaatgcactctcttctgatcaagaaccta
aagaatgaaattgtgaagaaagttcaggtgccgagctgtgaggaaatcttctacgccggg
acaggctccctgctgctgcgcgatgctgacggcgtcacgctgtttgatgtgcaacagaaa
cgctctttggcaaccgtcaagattgccaaggtcaagtatgtggtgtggagtgcagacact
agccacgtggctctgctggctaaacacgccattatgatctgcaaccgcaaactggagagc
ctgtgcaacattcacgaaaacatcagagtaaagagtggatcctgggacgagagtggtgtc
ttcatctataccacttccaaccacatcaaatacgctctgacctccggtgatcatggcatc
atcaggaccttggatctgcctatctatgtgacccgagtgagaggaaatagtgtctactgc
ttggacagagagtgcaggccccgcgtcctcaccattgaccccacagagtaccgcttcaaa
ctggccctggtgaaccgtaaatatgatgaggtacttcacatggtgcgtaatgccaagcta
gttggccagtccatcattgcctacctgcagaagaagggctaccctgaggtggcgctgcac
ttcgtcaaggatgagaagactcgctttagcctggctctggagtgcggcaacattgaggtg
gcactggaggcagcaaaggccctggatgagcgcagctgctgggagcgtcttggtgaggca
gcactgctgcagggtcaccaccaggttgtggaaatgtgctaccagaggaccaagaacttt
gacaagctcaccttcctttacctcatcacgggcaacctggccaaacttcgcaagatgatg
aagatcgctgagatcaggaaggacatgagcggtcactaccaggcagccctctacctggga
gacgtcagcgagagggttcgcatcttaaagaactgtggacaaaagtctctggcttacctg
actgcagccacacatggtctggatgaggaagctgaggcactgaaggagacctttgacttg
gaaaaggagacggtgccagaggttgatcctaatgcacagctgctgcagcccccaccacca
gttaaccctctggacaccaactggcctctgctcactgtatcaaagggcttctttgaggga
gccattgcagcaaaggggaaggcaggtcaaatggctgcagacctggacatggatacttca
gggggagagggctggggagacgatgcagagcttcagctggatgatgatggcttcatggat
gcccaggaaggattaggagatgaaggagtagcaaaggatgagggaggtggctgggaggtg
gaggaagacctggaccttcctccagagctggacattccggctggtgcagctggaggagca
gaggacggcttcttcgtcccaccaacaaagggaatgagtccaactcagatgtggtgcaac
aactcgcagttgcctgtggaccacatcctggctggctcatttgaaactgctatgagactg
ctccatgaccaggtgggagttgtgaactttggcccctacaagtcgctcttcatgcagaca
ctgtccagggggcgcacgtgttacctggcgctgccttcgctgccctgcctgcgcggccat
ccccagaggaactggaaggactgtggtgcgaagcagggactgcccgcagtgggtctgcgt
ctctccgacctcatttcccgcttgcagcagtgctaccagctgaccacttctgggcgtttt
gaagaggctgtggagcgcttcagagccatcctgctgtctatacctctgctggtggttgat
aacaagcaggaaattgcagaggcccaacagctgatcacaatttgcaaagagtacatagtg
ggcctgagcatggagactgagagaaagaagttgcctaaagacacgttggaacagcagaag
aggctgtgtgagatggctgcttacttcactcactgtaatctccagcccgttcacatggtg
ctggtgttgcgcacagctctgaacctcttcttcaaactgcgtaacttcaagaccgctgct
ggctttgcacgacgcctgcttgagctggggccaaagccagatgttgcacagcagacccgc
aagattttggcagcttgtgagaagaccttgacagatgcccaccaactgaactacgacccc
cacaatccattcgatctgtgcgctgcctcttttgtccctctgtaccgtggacgccctgta
gagaagtgccctctgtctggagcctgctactgtcctacgtacaaaggccagatctgcagg
gtcacccaggtaacagagatcggtaaggatgttatcggtctgcgtgtgagtcctcttcag
ttccgttaa
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integrated database retrieval system