Betta splendens (Siamese fighting fish): 114844324
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Entry
114844324 CDS
T08231
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114844324 (zc3h13)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
114844324 (zc3h13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
114844324
NCBI-ProteinID:
XP_028987447
UniProt:
A0A6P7KYB4
LinkDB
All DBs
Position
2:9097480..9107027
Genome browser
AA seq
1847 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSTTTSSTSNPAAPSRRPSVFERLGPSTGSNAAESHCRNWL
KTGNCSYGSTCRYTHGTQPRGKGFSFSRSTERPTGDLRERMKNKRQDVDPENLKRDLDEP
TSPTTRQRDSSRGRHREKEDIKITKERTPASEEEPTEWETNREDSDLGDYDYELSLEMKR
QKIQRELMKLEQENLEKREEIVIKKDETTTKTRTTVLPKVSPEHLSSKGSPSSKKSNGSP
KHKSGTKCGGKGLGSGKKEKKTLVTTSPISETVRPSKSGHGKKKGPRTPSPPPPVPLDLP
VTGKKHKGKHKNKEKSEEKQKEGKDRGRDIEKHKEKKEKRRDRSDSSHKAKRSVTSEERS
GSVSSPSRAASPSARKKSPSPKVSSHKTSTLDSPPRRSTSPPRHLRSPTPPRHHSPSSHS
GSSAQQHSPSPRRRRSSSPTYRRSAPASNSSPQSSRRSRSPPASHDNSSPHRRSDRSSPS
RRHSRDRERSRGDRERSPLIQERKHDRRDDSRSKREKDSIRNERDYDSEQVSSRDTRDDR
DSRDTRDARDRRDARDRGRESIRESRDHRDNRDVKDCRESKTEIRSSRESLERRDRERER
EREKERDKDREREKERDRAESYRKEELVQDDRSYGRGHGREDSGRTDRTERNGRGRGRSN
ETTEKGSNRNSRGSQLESSHDNWESRSSAARDRSVERSTDRSATERSSDRGSDRDRYESD
RRGEQTRDSSYDRRGGHAERDRRDNRDRVSPNRHQGRSEECEREERREDRRADRIDERRD
DRTRDRERERDREREREKEKDREREREKEREKEREAERERVREREREREREREREREREE
REREREERDRERKEREREREREREREREQRDRQREWEERERGREDRRERREESRDDRPVR
DTRDDRKISRKRQRVESSPSPRPSPKRAARDLSPADSDGYNSAEDKSERPIGRGQAKLHS
QPLLPSPVCPPPSDSSDKHRLLSQVVRPQEPLLRSPSRAALPEDKHSHWKDEERRGAGDK
RETRSRHEDFDPRGERSRGGDRRGDHLSDTPPDPRSRGRDQRESTPPPPPSALPGCGDDR
EIAGAPTHEEGKKKTKAQKKGLKKGRKEEEVGGGNRLAAASDRFNPEPPIGASADVPSSL
HSPRKVTKKKALDRKRKRSRGESDVSEDETSAPQPHGKRKRGPRTPPPSMRPDHRVTGGS
TELSPLSKVDNFSDWSDEEVTERGGPVETQSSLSLAERVPAEPLRRGGVPRVGRDRERCN
PPSIAPLLSQDPPMLLQTLTPQPLMSKSLLRKPPPEQTRSSSMGSNQSRTSSRRPRSPSI
ESAHRDDPQGQRSRRGRLQGTNSRDRERERERERPVGNDPPGAERKSRIDQLRRGEPSRS
TSSDRQDSRSHSSRRSSPDSERQARSRAGSYDSRERERDREPFERERDRDRKDMRPQQQQ
QQQQQQQSLLLQQPLQQQRDWEPEPRDWPSRGREPLLMRPGREPLLRERDIRDRERLLPE
GFIQQHERERDRERERDRERDGRIERVGDRDRERLMLMDLPLHGDPRGPGRGELRAEMRG
DMRGDMMRQDRSEYEPLLPREAFSPPEPEKPTNSHHLIGDQQDLEKADSIDGDDDGKEDD
GQSAASVGEEYEPISDDELDEILADSQKKEDQQDDEKISGPLDVIDVDWSSLMPKQKQEP
RAAGAALLRFTPGAVLLRAGISKRLAGAELMEQVKEVCKSELDDPKDADKLFEHDLGALN
MAALNRRVERAGLMSNLGLCCKALCARRDFAIRRQLLKNDKGLTKQYPATPVVDNDLLQM
SMRLFRRTMAGQPLAPERSDSVSAAAAEVAAPSSSKLSSAQPEVCVS
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtaacagtggagaattcaaaaaccatatctgacagcagc
agcaccactactagcagcaccagcaaccccgccgccccctcccgcaggcccagtgtgttt
gaaagacttggacccagcactgggagtaatgctgctgagagccactgtagaaattggctg
aagactggtaattgcagctacggcagcacttgtcgctacacacatggaactcagccacga
ggcaaaggatttagctttagtcggtcaacagagagacccacaggtgatctgcgggagagg
atgaaaaataaaagacaggatgttgacccagaaaacctaaaacgagacttagacgagcct
acatcccccacaactagacagagagactcctccagaggcagacacagggagaaggaggat
atcaaaattacaaaggagcgcaccccagccagtgaagaagagcccacagagtgggaaacc
aatcgtgaagactcagatcttggtgattacgactacgagctatctctagaaatgaagcgt
cagaagattcagcgcgagctgatgaaactggagcaggagaatttagaaaagagagaggaa
attgtcatcaaaaaagatgagaccaccaccaaaacaagaaccactgttttgccgaaggtg
tctcctgagcatttaagctccaaaggttcgccgtcatctaagaaatccaatggatcccca
aaacacaaaagtggaaccaaatgtggaggcaaaggactaggctctggaaagaaggaaaag
aaaacactggtgaccacctcacccatttcagaaactgtcaggccttcaaaaagtggtcat
ggtaaaaagaaagggccccgtacacccagtcctcctcctccagttcctctagaccttcct
gtgactgggaagaaacacaagggcaagcataaaaacaaggagaagtctgaggagaaacag
aaagaagggaaagatcgtggacgagacatagagaaacataaagagaagaaggaaaaacgc
agggaccgatcggacagttcccacaaggccaagcgatcagtcacatcagaagagcgttct
ggtagcgtgtcgtctccctccagggctgcatcgccctcagccaggaagaagtcaccatct
cctaaagtttcatcacataagacctctacactggactctcctcctcgcaggtctacctct
cctccacgacacctgcgtagccccacacctccccgccatcactcgccttcttcccactcg
ggttcttctgcccagcagcattctccatctccccgacggcgccgctcatcctctcccacc
taccggcggagtgctccagcctccaactcctcccctcagagctctaggcgctcccgatca
ccccctgcctcccacgacaactcctcacctcaccgccgatctgaccgatcaagtcccagc
cggcgccactccagggatcgcgaaaggagtcgtggtgacagagagaggagtccacttatt
caggaacgcaaacatgatcgcagagatgatagtcgaagcaagagagagaaagacagcatc
cgcaacgagcgggactatgactctgaacaggtctcctcacgggacacacgggatgacagg
gacagcagagacaccagagatgctcgtgatcgacgagatgcacgcgatcgggggagggaa
tcaatccgagagtctcgtgatcacagagacaatagggatgtaaaagactgcagagagagc
aagacagagatccgctccagtagagagtccctggagcggcgtgatcgggaacgagagaga
gagagggagaaagagcgggacaaggacagagagcgggagaaggaaagggatagggctgaa
tcctacaggaaggaggaactagtgcaggacgataggagttatgggagaggtcatggacgt
gaagatagtggcaggacagacagaactgagaggaatggacgaggtagaggacgttctaat
gagaccactgaaaaaggctcaaacaggaactccagggggtctcagctggaaagtagtcat
gataattgggagtcacggagcagtgctgcacgtgatcgaagtgtggagaggagcacagat
cgcagtgctactgaaagaagctcagacaggggctcagaccgagatcgctacgagagtgat
agaagaggagagcagactagggactcttcctatgacaggagaggaggtcacgcagaacgt
gatcgcagagacaaccgcgacagagtttctccaaatagacaccaggggaggtcagaggag
tgtgagagggaggaaagacgggaggatcgcagggcagacagaatagatgaaaggcgggac
gaccggacccgtgaccgggaacgagagagagacagggagcgagagagggagaaagagaag
gaccgagagcgcgaaagggaaaaagaacgagagaaggagagggaggctgagagggagcgg
gtcagggagcgagagcgggaacgagagagggaaagggaacgggagagggagcgtgaagag
cgagaaagggagcgagaggaacgagacagggagaggaaggagcgagagagggagagagag
cgggagagggagcgagagagggaacagcgggacaggcagcgggaatgggaggagcgagag
agagggagggaggacaggcgggagagaagggaagagagcagagacgatcggcctgttcga
gacacccgggatgatcgaaagataagccgtaagaggcaacgggtggagagcagcccgagc
ccccggccctcacctaagcgagctgcacgggacctgagtccagctgacagcgatggttac
aacagcgcagaagacaaaagtgagcgcccgattggccgaggacaggccaagctccactct
caacccctcctccccagcccagtgtgtccgcctccatctgacagcagcgataagcatcgt
ctgctgagccaagtggtgcggccccaggagccattgctacgttctccatcacgagctgct
ctgccagaagacaagcactcgcactggaaggatgaggaacgccgaggagcaggggacaaa
cgggaaacgcgcagccgtcacgaggatttcgatcctcggggagaacgtagcagaggtggt
gatcgacgaggagaccacctttcagacactccgcccgatccccgtagtagaggcagagac
cagcgggaatccactcctcctcctcctccttcagcacttcctgggtgtggtgatgataga
gagatcgctggtgccccgacacatgaggagggcaagaagaagacaaaggcacagaagaag
gggctcaagaagggtcgtaaggaagaggaggttggtggtggaaaccgcttggctgcagca
tcagaccgcttcaaccccgaaccccccattggggcttcagcagatgttccttcaagcttg
cactctcccaggaaagtaacaaagaaaaaggcactggatcgaaaaagaaaacggtcacgg
ggagaatctgatgtgtctgaggatgagacctcagctcctcagccacacggtaagaggaag
agaggtcccaggactcctccaccctcaatgagacctgatcatcgtgttactggaggcagc
acagaactttcaccactgtctaaggtagacaatttcagtgactggtcagatgaggaagtc
acagagcggggagggcccgtagaaacacaaagttccctgtcccttgctgagagggttcct
gctgagcctctgaggagaggtggtgtccccagggtgggcagggacagggagaggtgcaac
cctccttccattgcccctctgctttctcaggatccaccgatgctgttgcagactctgact
ccacagccacttatgtccaagtccctgctacgcaagcctccccccgagcagacacgcagc
agcagcatggggagcaaccagagccgcacatcatccagacgcccacgatcgccctccatt
gagtcggcccaccgagatgacccccagggccagcgatcccggcgaggcagactacagggc
accaactcccgtgacagagaacgagaaagggagagagagaggccagttgggaatgacccc
ccaggagcagagaggaagtctcgaattgaccagttgaggagaggagagcccagtcgcagc
acttcatcagaccgtcaggattctcgcagccacagctccaggcggagttctcctgactct
gagagacaagccaggtcccgtgctggctcctacgacagtcgagaacgggaaagagacaga
gaaccgtttgagcgggaacgagacagagaccgaaaagatatgcgacctcagcagcagcag
cagcagcaacagcagcaacagtccttgctccttcagcagcccctacagcaacagagagac
tgggagcctgaacctagagactggccaagccggggtcgtgagcctttgctgatgcgtcct
ggccgtgaacctcttttgagggagcgggacatcagagaccgggagcgcttgctcccagag
ggattcatccagcagcacgaacgggagcgagatagagagcgagaaagggaccgtgagaga
gacggcagaattgaaagagttggcgatcgcgacagggagaggttgatgttgatggaccta
ccactgcacggagaccccagaggtccaggacggggagaactgagggctgaaatgagagga
gacatgcgaggggacatgatgaggcaagatagaagtgagtatgagccactgctgccaaga
gaagctttcagccctccagagcctgagaaaccaacaaacagtcaccatctgatcggagat
caacaggaccttgagaaagcagacagcattgatggtgatgatgatggcaaggaagatgat
ggccagtctgctgcatcagtgggagaagaatatgaaccaatcagtgatgatgagctagat
gaaatacttgctgacagccagaagaaggaggatcaacaggatgatgagaaaatatcaggt
cctcttgatgtgattgacgtggactggtcgagcctgatgcccaaacagaagcaggagcct
cgggcagcaggagcggcgctgctccggttcacgccaggggctgtgcttctcagggcgggc
atcagcaagcgacttgctggcgctgagctcatggagcaagtcaaagaggtgtgcaagtct
gagctggatgaccccaaagatgctgacaaattgtttgagcatgacctgggagccctgaac
atggcagcccttaacaggcgagtggagagggcaggtttaatgagcaacctggggctgtgc
tgcaaggccctgtgtgcccgaagggactttgccatccgccggcaactcttaaaaaatgac
aagggtctaacaaaacagtaccctgctacgccggtggtagacaacgaccttctgcagatg
agcatgcggctcttcagaaggaccatggctggccagcctctagctccagaacggtcagac
agcgtgtcagcagctgcggctgaagttgctgcacctagcagcagtaagctgagctcagca
cagcctgaggtgtgtgtctcctga
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integrated database retrieval system
