Betta splendens (Siamese fighting fish): 114844555
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Entry
114844555 CDS
T08231
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X2
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114844555 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114844555 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114844555 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
bspl03029
]
114844555 (rb1cc1)
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114844555 (rb1cc1)
Membrane trafficking [BR:
bspl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
114844555 (rb1cc1)
Mitochondrial biogenesis [BR:
bspl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114844555 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
114844555
NCBI-ProteinID:
XP_028987856
UniProt:
A0A6P7KZJ8
LinkDB
All DBs
Position
17:complement(11091496..11102105)
Genome browser
AA seq
1617 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAADRRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLSSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFESAYTNYQH
DLEEIKVKLTKLGTAVAVMARIPLLECLTRHSYRESMEKSSSTPEKDSDETEEEKSTDSV
LCMNDAQKPSKLKSSFSASRTATCEPTDDQETNEITDSGGLRAALLDDEAPELTNPSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRDTIAKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VEALSSVPQMYCLAVVEVVRRKMFMRHYRGWAYALVKDGKQLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLEDLQYLKSCCPLEVQPFLMVPTMCD
FQPLHHHVETLHQLVQAAQSVDEMSRTITDLLSEQRASYSQSAHRSTAFTPQSDSIRGST
TSMSSKTPASLSLQGPSYHPIPVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEENLTSQNPISDPTSPEMMVESLYSSVINAIDNKRMQ
DTTTLERENSRITFLKQVIDKYRSAAEESHSNIRSVKGDLDHLRGLVLKEQHDFAFVLKS
MTRDVCDIVDNICQTHELELKEQHQSELLSVRQEHDKQVQTLMEENQVNQNIVKDVQRAM
LELEGLMERKEKELTQFENERERWVQSESNHTDQIKTLEQMISDQSEEIKMLSALRDSLT
SQLEHLHFEIERGQQKIRQELEVAEKSHLNELQDRLKQEHRAELESITKSNCEALEILSA
ENIAKLSEAADQHTCMLREKDDQLKNLEIRMTELAELRCKLEMELALKESETEEIKLLFE
ETKMQQAESVKTQVEDCTKVLSEELAEVKKRLQVKNEEYEVDLAELRTLMRIEKDHCISE
LVDRHEEETTLLRNKLFSMEQQIQKVESNHAEQQQEFSTQVAALSEEREKQQISFQGLEQ
ELRTVVNTLQAENDLLSKKLEQHRQEVETQQSAKVASPDAFKELEQQKEEMETRLLDKIR
QLENELQERQSSKSEEGRSLCAEGRADAPTPLSLDSALQERLQQERASMQSEMELLEKKK
NEEIQNLKTSLIAEQQTNFNTVLTREKLRKEQIINDLTEKLRKVTQQQEKDKALIETLSE
DRASVMQEKKHLEEELNRLRSTTLVSSAFFTSNPSAQEVMEAGAAALTARALPVAGACSS
EPMAEAERLASVATIRDDEHVDSAVEASMVTVHENIMISEEKQRILLLERTLHMKEEENK
RLNQRLMSQSMSSVSSRNSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSES
LTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacactgacatttgacaccgatctt
gctgttcaaactgttctggaacttaaacatgcaatccaagccaaatacaagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggcagcagatagaagagtctgc
agctacagtgctggcactgaaaccaatcccatattcctgttcaacaaagagatgatcctg
tgtgaccgggatccaacgatcccaaaaaccaccttttccattgagagtgagattcaagtt
aaggtggaggagtctctactaatgccagctgtctttcacaccgttgcctcaagaacacaa
cttgccctggaaatgtttgaagttgccaagaaacttagctctttctgtgaacgtttggtt
catgatgaacaccttcaacaccaaggctgggcagcaattatggctaatctggatgactgt
actctgtcttatcagaagttgctcatgaaatttgaaagtgcatatacaaattaccaacat
gacttagaagaaataaaggtgaaactcacaaaattggggactgctgttgctgtaatggca
aggatacctttgctggaatgtttgacaaggcacagttatagggagagcatggaaaagtcc
agttcaaccccagaaaaagattcagacgagacggaagaagagaaatccactgactctgtg
ctttgcatgaatgatgcgcagaagccctccaagttaaaatcatccttctctgcttcgagg
acagccacttgtgagccaactgatgaccaggaaacgaatgaaattactgacagcggtggg
cttagagctgcattattggatgacgaagctccagagcttaccaacccttcgtctttcaat
gtcacactgttagattggatcaatgtacaagatagacccaatgatgtggaatcagttgtg
aggaaatgctttgattctatcaataggcttgatccccggatcattcaacccttcctcaca
gagtgtcgtgacacaattgccaagctagataatcaaaacatgaaagccattaaaggactt
gaggatcggctgtacgcactagaccaaatgattgcaagctgcaaaaagttggtaaatgaa
cagaaagaacttgctcagggatttttagccaatcagaagagggctgaaaacctgaaggac
acatctgttctgcctgatttgtgtctaagtcacaccaaccagttgatgatcatgctgaac
aaccaccggaagctgctagacatcaaaaagaagtgcaccactgccaaacaagaactagca
aacaaccttcaagtccgactgaaatggtgctgttacgtgatgcttcatgcagaccaggat
ggggagaagctgcaggctctactcagacttctgacagagctaatagaaagagtgagagtt
gtggaggccctcagtagtgtcccccagatgtactgcttggccgtggttgaagttgtcagg
agaaagatgtttatgcgccactacagagggtgggcttatgcacttgtgaaggatgggaag
caactctacgaggcagagaagttcaaaagggaatcctttgggaaactgttccgaaagtct
ttcctcagaaatcgcttgtttaggggacttgattcatggcctccaacttcattttgtaca
cgaaagcccagaaggtttgatgatgaacttccagacatctcacttgaggacctgcagtac
ttgaaatcttgttgtcctttagaagtgcagcctttccttatggttcccaccatgtgtgac
tttcagcctttacatcaccatgtggaaacactacaccagctggtccaagcagcgcaaagt
gtagatgagatgtctcgaaccatcactgacctgctaagtgaacaaagggcatcttacagc
cagagcgctcatagatcaactgcattcaccccacagtctgatagcatacgtggcagtacc
acatcaatgtcctccaaaactcctgcctctctcagccttcagggacccagctaccatccc
atacctgttcccgtcccagctccactagaggatctatctcccgacagcattgatgcacaa
acatttgactttgaaaccattggccatccaaacatggacccagtgttgcagcagggctca
ctggatctggattctctagcagagagccctgaatctgactttatgtcagctgttaatgag
tttgtaattgaagagaacttgacctctcaaaaccccataagtgatcccactagccccgag
atgatggtggagtcattatactcctcggttatcaatgctattgacaacaagcgtatgcag
gataccacaacactagagagggaaaactccagaatcactttcctcaaacaagtcattgac
aagtatcgatctgctgcagaggagtcccattccaacataagaagtgtaaagggtgatctt
gatcacttacggggtctagttttaaaagaacaacatgacttcgcttttgttctcaaaagt
atgaccagagacgtatgtgacattgtggacaacatctgccagacacatgaactggagttg
aaggagcagcatcaaagtgagcttttgtcagtacggcaagagcatgataagcaggttcag
acactaatggaggaaaaccaagtgaatcagaatattgttaaagatgtgcaacgggcaatg
cttgagttagaggggcttatggagcgcaaagagaaagaacttacgcagtttgagaatgag
agagagcgttgggttcagtccgagagcaaccacacggaccagatcaaaaccctggagcag
atgatcagtgatcagtctgaagagatcaagatgctctcagcactgagagattcactgacc
agccaacttgagcacctgcattttgagattgaacgtggccaacagaaaattcggcaagaa
ttggaagttgctgagaaatctcacttaaatgagctgcaggacagattgaagcaggagcac
agggcagaactggaaagcatcacaaagagtaactgtgaggctctggagattctgagcgct
gagaacattgcaaagttaagtgaagcagctgatcagcacacatgtatgctaagagaaaag
gacgaccaactgaagaacttggagatccgcatgactgagttggcggaactccgctgcaaa
ttagagatggagttagccctcaaagagtcagagacagaggagattaagctcctgtttgag
gagaccaagatgcagcaggctgaatcagtgaagacccaggtagaggattgtaccaaagtc
cttagtgaggaactggcagaggtcaaaaaacggcttcaggtcaaaaacgaggaatatgaa
gtggacctagccgaacttaggacactcatgaggattgagaaagaccactgcatttcagag
ctggtggacagacacgaggaggagacgactttgttgcgcaataaacttttttccatggag
cagcagatccagaaagttgagagtaaccacgctgagcagcagcaggaattcagcacgcaa
gtggctgctctaagtgaggaaagagagaagcaacagattagtttccaaggactggagcaa
gagttgaggactgttgtcaacactttgcaggcagaaaatgacctgctgtctaaaaagcta
gagcaacacaggcaggaggtagagacacaacagtctgctaaggttgcatcaccagatgcc
ttcaaagagttagagcagcagaaggaggaaatggagacgagactgttagacaaaattaga
caacttgagaatgagcttcaggagagacaatcttcaaaaagtgaggaaggccggtctctg
tgtgctgagggccgagcagatgccccaacgcctctgtctctagactcagcactacaggag
aggctgcagcaggaacgggcctcaatgcagtctgagatggagctattagagaagaagaaa
aacgaggagatacagaatctcaagacgtcactaatcgcagagcagcagacaaatttcaac
actgttctaactcgagagaaactaaggaaggagcagatcattaatgatctcacagaaaag
ttgcggaaagtgactcaacagcaggagaaggacaaagccctgatagagactctttccgag
gatcgggccagtgtcatgcaggagaagaaacacttggaagaggagctgaaccgcctgcgc
agcactacgctggtctcgtctgccttcttcacttctaacccgtccgctcaggaggtcatg
gaagccggagcagcagcgctaacagctcgagcgctgcctgttgcgggggcctgctcctct
gagcccatggctgaagctgaaagactggcatctgtggcgaccattagagatgatgaacat
gttgattcagcagtggaagccagcatggtgacagtccatgaaaacatcatgatttcagag
gaaaaacaacggatacttttacttgagaggactttacacatgaaggaggaagaaaacaag
cgcctaaatcaaagactgatgtctcaaagcatgtcgtctgtgtcgtcacggaattcagac
aaaatcgccatcagagatttccaggtaggtgatttggttctgatcatcctggatgaaagg
cacgacaactacgtgctcttcacagtaggtcccaccctctacttcctccactcagagtct
ctcactgcactggacctcaaaccagcatcagggacctcaaggcggccatgggtgctagga
aaggtgatggagaaggaatattgccaggcaaaaaaggctcagaacaggttcaaggttcct
ctaggaaccaagttctacagagtgaaagctgttccatggaacagaaaagtataa
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integrated database retrieval system
