Betta splendens (Siamese fighting fish): 114844842
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Entry
114844842 CDS
T08231
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52 isoform X2
KO
K24728
cilia- and flagella-associated protein 52
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114844842 (cfap52)
Cilium and associated proteins [BR:
bspl03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
114844842 (cfap52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
NBCH_WD40
WD40_like
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
KNTC1_N
Beta-prop_VPS8
Beta-prop_RIG_1st
Beta-prop_SPT8
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_LRRK2
Beta-prop_WDR75_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
114844842
NCBI-ProteinID:
XP_028988356
UniProt:
A0A6P7L132
LinkDB
All DBs
Position
1:8561074..8570321
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AA seq
619 aa
AA seq
DB search
MDVEKVDAPQLELEAVIGFNGHVVSGLRVHPDRDHLIYPLGCTVVVKRLKDGKQDLLHGH
TNNVSCISVSKNGLYIASGQVIFMGFKAVIIIWDFAGRSIYAELSLHQAKVESLAFSPNS
KYLVSLGGQDDGSIVVWNVETKQAICGSPASAYSTGHCLTVQYSNTNDNVFVSAGNRTLR
VWELDLRNRKIRPTECQTGKLKRIVKCIEMSEDDQFIFCGTTSGDIMKINMKTGLLSNCG
PLKTKLNLGVSVLRMLQSGDLLVGSGSGTFTLCSRNNFKTLKEVQLEKGVTSITLRGEGQ
QFFVGTEAGQMYRFSYQDFTPELISTSHPSAVKDVAIPFGTSELFATCSEEDIRVWHIDK
AKELLRITVPNMTCNSLDFMVDGHSIISAWNDGKIRVFGPESGRLMLIIHNAHRMGVTAI
AGTRDCKRIVSGGGEGQVRVWELHSSGHQLLETMKEHKATVTCIKIKSDDKMCVTASSDG
ACIIWDIVRFLSLQMVIANTMFRTVCYHPEEYQIITSGTDRKVAYWDVYDGAALRELEAS
KSGAINGMDISQDGKYFVTGGDDKLVKVWDYMEGVVTHMGIGHGGSIVSVKICSNSRTLI
STSADGAVLRWRFPHSSTY
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagaaaaagtggacgcgcctcagcttgagctggaggctgttatcggcttcaac
ggtcacgtggtttctggcctgagggtccacccagacagagatcacctcatctatccactg
gggtgcacagttgttgtgaagagactcaaagatggcaaacaggacctgctgcacggacac
acaaacaacgtgtcctgcatttcagtgtccaaaaatggactgtacatcgcctctggacag
gtcatcttcatggggtttaaggctgtcataatcatctgggactttgcgggacgttccatc
tatgctgagctgtccctccaccaggctaaggtcgagtcactggccttctctcccaacagc
aagtacctggtgtccctggggggtcaggacgatggcagtattgtggtgtggaatgtggag
accaaacaggctatctgcgggagcccggcatcagcttacagcaccggtcactgcctcact
gtgcaatactcaaacactaatgacaatgtgtttgtctctgctggaaatcgaacgctgaga
gtctgggagctggacctccgcaacaggaagatcagacccacagagtgtcagacaggaaag
ctgaagaggattgtaaaatgcatagagatgtcagaggatgatcagttcattttctgtggc
accaccagcggagacataatgaaaatcaacatgaagacaggtcttctgagcaattgtggt
ccacttaaaacaaaattaaacctgggtgtcagtgtcctaaggatgcttcagtctggggac
ctgcttgtaggctctggatctgggaccttcactctgtgttccaggaataacttcaagact
cttaaggaggtacagctggaaaagggggtgacctccattactttaagaggagaaggccag
cagttctttgttgggacagaagccggtcagatgtatcgcttcagttaccaggacttcacg
cctgaactcatatctaccagccaccccagcgctgtcaaagacgtagccatcccttttgga
acatctgaattatttgcaacctgctctgaggaggacatcagagtgtggcacatcgacaag
gccaaagagctactgcgcatcactgtacccaacatgacgtgcaattccctggacttcatg
gttgacggacatagcatcatcagtgcatggaatgatgggaagattcgcgtgtttggccct
gaaagtggtcggttgatgctcattattcacaacgcgcacagaatgggcgtgacagccatc
gctggcaccagagactgcaagaggatagtcagtggaggaggagaggggcaggtgcgtgtt
tgggagctgcattcaagtggacatcagctcctggagaccatgaaagagcacaaagccacc
gtcacctgcatcaaaatcaagagcgatgacaagatgtgtgtcactgctagctctgatggc
gcctgcatcatttgggacatagtgcgatttctgagtcttcaaatggtgatcgccaacaca
atgttcaggacagtgtgctaccacccagaggagtatcagatcatcaccagtggcacagac
aggaaggtggcctactgggacgtgtacgacggcgccgccctcagagagctggaagcctcc
aagtccggggccattaacggcatggacatctcacaggacggcaaatactttgtgacaggt
ggtgatgacaagctggtgaaggtgtgggactacatggagggagtggtcacccacatgggg
atcggtcacggcggaagtatcgtcagtgtcaagatttgctccaacagccgcaccttaatc
agcaccagcgcagatggagctgttctccggtggaggttccctcactcctccacctactaa
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