Betta splendens (Siamese fighting fish): 114844961
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Entry
114844961 CDS
T08231
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114844961 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114844961 (ndc1)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114844961 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
114844961
NCBI-ProteinID:
XP_028988523
UniProt:
A0A6P7L1K8
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All DBs
Position
17:complement(13423535..13429697)
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AA seq
667 aa
AA seq
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MFSTQQSCWFTRKVICWRAAASNAWAVLLLPPITAVFLITSRFSLFRPIQTISECLSLLT
SASAIFCFILLCGVILMSGFLNLEYYTVIPNIACSKIALLGQLLHPRQFVSFLVHSIMGI
IVAWCCAITIGDRYETLAYPCTQSDGSSRMCLNEFHVVLVLAGGFVGFSHSLLSVIYNIN
YVSFSAVQQYKYLRFKGSLSLVVKCSASQALYSIRNYIVVYFFLGHIPKAWMCKTLNLHL
SSSAHPLDSITGLLDLYLLYHLWISATFLLFIWYITLLLFRIFITEAYSFPVQSTFTEDS
QQCLPKVLPEKQPVVLKFLALQDLALLSQHSPSRRSEVFSLSQPGGHAHNWNAISKECLA
LLNELTQRLVAHHDTVATNGRAKSLSTGSERRTSSETSVTSEDLMSPRPTVLTKTPASVF
ARSIVGGQQSPLTAPFTPDLDSPFASPALRRLTAPVEQCSPWHGTVQSPHVMRRGPKLWS
TSTDSQVNGSPTASPGLVPSPKQESAKPSFLAQFLHNRKEQVKQFLAKRVLIMYLFNKLP
EASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILSSMLFLQEAVDRYFK
LPHASSKPSRSTIGMGDSSYKTLRFALRATLKTALYRITTTFGDHLKAVQMSADHRKRLQ
QFLEYKE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaacacagcaaagttgctggttcactcgcaaggtgatttgctggagagctgca
gccagtaacgcctgggctgtcctgttgttgccacccatcacagcggtttttctaatcacc
agcaggttcagtcttttccgccccatccagacaatatcagaatgtttgtccctactaaca
agtgcaagtgccatcttctgtttcatcctgctgtgtggcgtgatactcatgagtgggttt
ctaaatctagagtattacacagtaattcctaacattgcatgctcgaaaatcgcactgctg
ggtcagctgctccaccctcgtcagtttgtcagcttccttgtccatagtatcatgggaatt
attgtggcttggtgttgtgccatcaccattggagatagatatgaaacactcgcctacccg
tgcacacagagtgatgggtcttctcggatgtgtctgaatgagtttcacgtcgtccttgtt
ctggctggaggttttgttggattctctcacagtctgctgagtgtaatctacaacataaac
tatgtctctttcagcgcggttcagcaatacaaataccttcgcttcaaaggatctctttct
ttggtggtgaaatgcagcgcctctcaagcactttactctatcaggaactacattgttgtt
tatttctttttaggacatattccaaaagcatggatgtgtaaaacactgaatcttcatttg
agcagctctgcccaccctcttgactcaataactggactcttggacctctatctgctctac
cacctgtggatcagtgccaccttcctgctgttcatatggtacattactctgctgttgttc
cggatctttattactgaggcctacagttttcctgtgcagtcgacttttactgaagattcc
caacaatgtcttcccaaagttctgccagagaagcagccagtggtattaaagtttctagct
ttgcaggacttggctctgctctctcaacactccccatcacgccgctctgaggtcttcagt
ctgagtcagcctggtggtcatgctcataactggaacgccatcagtaaggagtgtctggct
ttgctgaatgaactgactcagagacttgtcgcccatcatgacactgtagcaactaatggc
agggccaaatcgctttctactggtagtgaaagaaggacatcatctgagacatcagtaaca
tcagaggatcttatgagtccaagaccaactgtgctgactaagactccagcttcagtcttt
gcccgatctatcgttgggggccaacaaagccctctgacggcgccattcactcctgacctg
gacagccccttcgcgtctccagccctgaggcgtcttactgctccagtagaacagtgctca
ccatggcacggcactgtgcagagcccacatgtcatgagaagaggaccaaaactttggtcc
acttccactgattcacaggtcaatggcagccccacagcttcccctggcttagttcccagt
cccaaacaggagtcggccaaaccaagttttctggctcagttccttcacaacaggaaagaa
caggttaaacagttcttggcaaagagagtgctgataatgtatttgtttaacaagcttcca
gaagcctccagtcaggctctgtttgccgacagccaggctcacatctgggccttggaaggg
ctgtcataccttgttcaagcctccttctctgaagaccagtttggggtggtacaaactacg
ttacccagcattctcagttccatgctgttcctgcaagaggccgtagaccgctacttcaag
ttgccccacgcgtccagtaaacccagcaggtcgaccatcggtatgggagactcctcctac
aaaacactgcgctttgctctcagggcaacactcaagactgcactctaccggataacaacc
acttttggagatcacttgaaagctgttcagatgtctgcagaccaccggaaacggctgcag
cagttcttggagtacaaggaataa
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integrated database retrieval system
