Betta splendens (Siamese fighting fish): 114845454
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Entry
114845454 CDS
T08231
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04145
Phagosome
bspl04510
Focal adhesion
bspl04512
ECM-receptor interaction
bspl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114845454
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114845454
09144 Cellular community - eukaryotes
04510 Focal adhesion
114845454
09142 Cell motility
04820 Cytoskeleton in muscle cells
114845454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114845454
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bspl04147
]
114845454
00536 Glycosaminoglycan binding proteins [BR:
bspl00536
]
114845454
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Phagocytosis
Opsonins
114845454
Exosome [BR:
bspl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114845454
Exosomal proteins of colorectal cancer cells
114845454
Exosomal proteins of bladder cancer cells
114845454
Glycosaminoglycan binding proteins [BR:
bspl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114845454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_CCN
TSP1_ADAMTS
cEGF
Motif
Other DBs
NCBI-GeneID:
114845454
NCBI-ProteinID:
XP_028989318
UniProt:
A0A6P7L7Y1
LinkDB
All DBs
Position
19:complement(12830255..12845179)
Genome browser
AA seq
949 aa
AA seq
DB search
MSPARPFPWLLCFLCAAAPGAGVGGARAANASEMCRHACDDLVDLITEIHGLRIVTSNLL
VDLERVSKENEEMRVSLADLSSSSGGGGGGRGGGGGRGGDGEVWCAQDGRVYEQGEDWEI
DSCTSCACWEGKVVCHHVSCPPVSCVNPSFIDDKCCPVCLRDEDGWSPWSEWTHCSSTCG
RGGQQRGRSCNGIVPSCAGPSVQTRSCSIAKCERKVHSDGNWGLWSPWSACTTTCGDGSV
TRVRLCNNPPSRKGGRGCAGGGVETRPCNNTLCPVAGGWTTWTEWSRCSESCGGGLVRRQ
RDCVNPAPQNGGRPCAGDAADYEACNKQPCPIDSCLLSNPCFPGVKCTSHVDGSWECGRC
PVGLQGNGTHCEDENECEVEGVCVTQCVNTDPGFYCLPCPPRYKGSQPFGLGLQEAQTIK
QVCEPHNPCKDQTHTCHRFADCFYLGLASKALFRCSCSVGFAGDGSLCGEDSDLDAWPNN
KLPCRENATYHCQKDNCPTIPNSGQEDLDMDGQGDACDPDDDNDDIMDERDNCPLVYNPR
QFDSDADGVGDRCDNCPFDSNPLQTDTDGDGEGDACSVDVDGDEILNERDNCPLVYNTEQ
RDTDLDGVGDQCDNCPLLHNPLQLDSDSDLVGDACDDNDDVDEDGRQNSLDNCPYVANGN
QADHDGDGRGDACDHDDDDDGVPDNRDNCRLVPNRDQLDSDGDGSGDACFDDFDNDSVPD
ALDACPLNQDIGSTDFRKFQVVLLDPAGTTQSDPLWVVRGQGTELLQAANSDPGIALGYD
KFSSVDFSVTFYVNTDRDDDYAGVVFSYQSSRRFYVVMWKQVSQAYWEKRPFKAFATAGV
SIKLVNSTTGPGEHLRNALWHTGNTRNQVRTLWHDPSKTGWRDYTAYRLHLIHRPRTGFI
RVVVYEGRQILSDSGAVYDHALAGGRLGLFCFSQEHVLFSDLRYECRDN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagtccggcgagacctttcccctggctcctctgcttcctgtgtgcagccgcaccgggc
gcaggtgtgggcggggccagagcggccaacgcgtcagaaatgtgccgccacgcgtgcgac
gacctggtggacttgatcaccgagatccacggcctgcgcatcgtgaccagcaacctgctc
gtggacctggagagggtgtccaaagaaaacgaagagatgcgcgtgtctttggccgatctg
agcagcagcagtggaggaggaggaggaggaagaggaggaggaggaggaagaggaggagac
ggggaggtgtggtgcgcgcaggacggacgtgtgtacgagcaaggggaggactgggagatt
gacagctgcacgtcctgcgcttgttgggaaggtaaagtggtgtgtcaccacgtgtcctgt
cctcccgtgtcctgcgtcaacccgtccttcattgacgacaagtgctgccccgtctgcctc
cgagatgaagacggctggtccccgtggtcggagtggacccactgctcgtccacgtgcggc
cgtggaggtcagcagcgcggccgctcctgcaacggcatcgtgccgtcgtgcgccgggccg
tcggttcagacccgcagctgcagcatcgccaagtgcgagcgtaaagtccactctgacggg
aactggggcctctggtctccgtggtccgcgtgcaccaccacatgtggcgacggcagcgtc
acgcgggtgcgtctctgcaacaaccccccgtccaggaaggggggcagaggctgcgccggc
ggcggcgtggagacgcggccgtgcaacaacacgctctgtcccgtcgccggaggctggaca
acctggactgaatggtcgcgctgctcggagtcatgtggaggaggcctcgtgcgccgccag
cgggactgcgtgaaccctgctcctcagaacggagggaggccgtgcgccggagacgctgca
gactatgaagcctgtaacaaacagccctgtcccatagactcgtgtctgctgtccaatccc
tgttttcctggggtgaagtgcacgtcccacgttgacggctcgtgggagtgtggacgctgc
cccgtgggtttgcagggcaacgggacccactgtgaagatgagaacgagtgtgaggtggag
ggtgtgtgtgtgacccagtgtgtgaacacagaccccggcttctactgcctgccctgccct
cctcgctataaaggctcccagcccttcggcctcgggctgcaggaggcccagaccatcaaa
caggtgtgcgagccgcacaacccctgcaaagaccagacgcacacctgccacaggttcgcc
gactgcttctacctgggcctggcgtctaaggccctgttcaggtgctcgtgcagtgtgggc
ttcgcgggcgacggctccctgtgcggcgaagactcggacctggacgcgtggcccaacaac
aagctgccctgcagagagaacgccacctaccactgtcagaaggataactgccccacaatc
ccaaactccggccaggaagacttggacatggacggacagggggacgcctgcgaccccgac
gacgacaacgacgacatcatggacgagagggacaactgcccgctggtctacaacccccgg
cagttcgactcggacgcagacggggtcggggaccgctgcgacaactgtccgttcgacagc
aacccgctgcagacggacacggacggcgacggcgagggagacgcctgcagcgtggacgta
gacggagacgagatcctgaatgaacgtgacaactgtcccttagtctacaacactgagcag
agggacacggacctggacggagttggagaccagtgtgacaactgtcccctgctgcacaac
ccactgcagctcgactccgacagcgaccttgtgggggacgcgtgcgacgacaacgacgac
gtcgacgaggacggccgccagaactccctggacaactgtccctacgtcgccaacggcaac
caggcggatcacgacggcgacgggaggggcgacgcctgcgaccatgacgatgacgacgac
ggcgtccccgacaaccgggacaactgccgactggtgcccaaccgggaccagctggactcg
gacggcgacggcagcggcgacgcctgcttcgacgacttcgacaacgacagcgttccagac
gcgctggacgcctgtccgctgaatcaggacatcggctccacggacttcaggaagttccag
gtggttctgctggaccccgcgggcaccacgcagtcggaccccctgtgggtggtccgcggc
cagggcacggagctgctgcaggcggccaactcggacccgggcatcgctttgggatacgac
aagttcagctcggtggacttcagcgtgacgttctacgtgaacaccgaccgcgacgacgac
tacgccggcgtcgtgttctcctaccagtccagtcggcgcttctacgtggtcatgtggaaa
caggtgtcgcaggcctactgggagaaaaggcccttcaaggccttcgccaccgccggcgtc
tccatcaagctggtgaactccaccactggcccgggggagcatctccgcaacgccctatgg
cacacggggaacaccaggaaccaggtccggacgctgtggcacgaccccagtaaaaccggc
tggagggactacacggcctaccgcctgcacctcatccacaggccccggaccgggttcatc
agggtggtggtgtacgagggcaggcagatcctgtcggactcgggcgcggtgtacgaccac
gcgctggccggaggccggctgggcctgttctgcttctctcaggaacacgtcctcttctca
gacctcagatacgagtgcagagacaactga
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