Betta splendens (Siamese fighting fish): 114845765
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Entry
114845765 CDS
T08231
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114845765 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114845765 (msh2)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114845765 (msh2)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
114845765
NCBI-ProteinID:
XP_028990007
UniProt:
A0A6P7L677
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Position
19:complement(12942588..12949410)
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AA seq
936 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLSFVFSMPEKPDTTFRVFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRRLESVVLSKLNFEAFVKDLLLVRQYRVEVYRNHSKSSKEHDWKLEYKA
SPGNLTQFEDVLFGSGGTGAEGSAGVVAVRFATGADGQRVVGVGYVDAAQRKMGVCEFPD
NEIFSNLESLLVQISPKECLLAQGEANTEGNKLREVVQRGGMLVSERKRAEFSSKDMVQD
LNRLLRAKRGETVASNTLPELDKQVAMSCLGAVVRFLELLSDESNYNSFSLTSLDLGQYM
RLDNAAVRALNLFQGSPDDTTGAHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKTRIEERL
DLVESFVSDSELRQTCQEDLLRRVPDLHRLAKKFHRHNATLQDCYRVFQAVSQIPALITA
LERYSGSFHVLLEATFLSPLRDLQNDFTKYQEMIETTLDMNQIDHHEFLVKASFDPVLSE
LREKMDALEKSMQAVLNSAAKELGLDAGKTVKLESNAMLGFYLRVTCKEEKSLRNNKKFT
TLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIINIASGYVDPLQALSDVIA
QLDAVVSLAVASVSAPVPFVRPRILADGPRRMELLQARHPCMETDADTAFIPNDITFVQG
EKNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSVLARVGAGDSQVK
GVSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKITCFCLF
ATHFHELTALAAQQPTVRNLHVTALTTHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSV
VAMAKEKAEELEEFQEPARGDLEQEEEPEAKRRRTDKQVGEDLIQNFLEKVKSLPAAAMS
DEEVKAELRRMKQELAAKKNSYITEILARCVPAQTA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaagcagaacctgtccatggacagtgcagccgagcacggcttcctc
agcttcgttttctccatgccggagaaaccggacaccacgttcagggtgtttgaccgtaac
gactactacacggttcacgggaaggacgccatattcgcggcgaaggaggttttcaagacg
aatggagtcatcaaatatctgggctcgggaagtcgcaggctggagagtgtggtcttgagc
aagctgaacttcgaggcctttgtgaaggacctgctgctggtgagacagtacagagtggaa
gtgtacaggaaccacagcaaaagcagtaaagagcacgactggaagcttgagtataaggcg
tctcctggaaacttgactcagtttgaagacgttctgtttggttctggaggaaccggagca
gagggctctgcaggagtcgtggccgtccgattcgctacaggagccgatggacagcgcgtg
gtcggggtcggctatgtggacgcagcgcagcgaaagatgggagtgtgtgagtttccagat
aatgagatcttctccaacctggagtcgctgcttgtccagatcagccccaaagagtgtctc
ctagcccagggggaagccaacacggagggcaacaagctgcgggaggttgtgcagcgcggt
ggcatgttggtctccgaaaggaagagagcagagttcagtagcaaggacatggtccaggat
ctcaaccgactgctaagagccaagagaggagagactgtggccagtaacacgctgcctgag
ttggacaaacaggtggctatgtcgtgcttgggcgccgttgtgcgttttctcgagctcctc
tctgacgagtccaactacaactctttcagtctcacctctctggacttgggtcagtacatg
aggctggacaatgctgctgtgagggctctcaacctcttccaggggtcacctgacgacacc
actggggctcattctctggccggtctgttgaacaagtgtcgaacgccacagggtcagcgt
ctggtcaaccagtggatcaagcaacccctcatagacaaaaccagaatagaggagaggcta
gacctggtggagagcttcgtgagtgactctgagctcaggcagacctgtcaggaggacttg
ctgcggcgggtccctgatcttcaccgtctcgccaagaagttccatcgccacaatgcaacg
ctgcaggactgctaccgcgtcttccaggccgtgagccagatccctgcgctcatcacagcc
ctggagagatactctgggagcttccatgttctgttagaggcaacgttcctcagtcccctt
agagacctgcagaatgacttcacaaagtaccaggagatgatagagaccaccctggacatg
aaccagattgaccaccatgagttcttggtgaaggcatcgtttgatccagtattgagtgaa
ttaagggaaaaaatggatgcactcgagaagagcatgcaggcggtgttgaacagtgcagcc
aaagaactaggtctggatgctggtaaaactgtgaaactggagtcaaacgccatgttgggt
ttttacctgagagtcacctgcaaggaggagaagagcctgaggaataataagaagttcacc
acgctggacgttcaaaagaacggtgtgcgcttcactaacagtaagctgagctccctgaat
gaggaatacaccaagagcagggaggagtatgaggaggcccagaacgccatcgtcaaagag
attatcaacattgcctcaggttacgtggaccctctccaggcgctgagcgatgtgatagca
cagttggacgccgtggtgagtctcgccgtggcgtctgtctctgctccagtgccatttgtc
cggccccgcatcttggccgacggccccaggcgtatggagctgctgcaggccagacatccc
tgcatggagacggacgcagacaccgccttcataccaaatgacatcaccttcgtccaggga
gagaagaacttctatattattacaggaccgaatatgggaggcaagtccacttttatccgg
caggttggtgtgatagctttgatggctcagatcggctgcttcgtgccatgtgagaaggca
gagctcagcgtgattgacagcgttctggctagagtgggagccggcgacagccaggtgaaa
ggcgtgtccaccttcatgtctgagatgttggagactgccgccattttacgctcggccaca
gagaactcgctcatcatcatcgacgagcttggcagaggaacctccacatatgacggcttc
ggtctggcctgggccatcagcgaacacatcgcatccaagatcacctgcttctgcctgttt
gccactcatttccatgagctgactgcactagctgcacagcagcccactgtccggaacctg
cacgtcactgcgctcaccacccacaacaccctcactatgctgtacagagtcaaaccaggt
gtctgtgatcagagttttggtatccacgtcgccgagttggcttgctttccaccatcagtg
gttgccatggcaaaagagaaggcggaggagctggaggagttccaggaacctgcaaggggg
gacttggagcaggaggaagaacccgaggccaagagacgacggacagacaaacaagtgggg
gaagatctgatccagaacttcttggagaaggtgaaatcgcttccagctgccgccatgagt
gatgaggaggtgaaggcagagctcagacgaatgaaacaagaactggctgccaaaaagaac
tcgtacatcacagagattctggctcgctgtgttccagcccaaactgcttga
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